SCOPe 2.08: Domain d1m2vb2: 1m2v B:61-215,B:553-646

Lineage for d1m2vb2 (1m2v B:61-215,B:553-646)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.8: beta-sandwich domain of Sec23/24 [81995] (1 family)

5. Family b.2.8.1: beta-sandwich domain of Sec23/24 [81996] (2 proteins)

6. Protein Sec24 [81999] (1 species)
   includes the N-terminal tail

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82000] (4 PDB entries)

8. Domain d1m2vb2: 1m2v B:61-215,B:553-646 [78498]
   Other proteins in same PDB: d1m2va1, d1m2va2, d1m2va3, d1m2va4, d1m2va5, d1m2vb1, d1m2vb3, d1m2vb4, d1m2vb5
   complexed with zn
   has additional insertions and/or extensions that are not grouped together

Details for d1m2vb2

PDB Entry: 1m2v, 2.75 Å

PDB Description: Crystal Structure of the yeast Sec23/24 heterodimer

PDB Compounds: (B:) protein transport protein SEC24

SCOPe Domain Sequences for d1m2vb2:

Sequence, based on SEQRES records:

>d1m2vb2 b.2.8.1 (B:61-215,B:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fltpaqeqlhqqidqattsmndmhlhnvplvdpnaymqpqvpvqmgtplqqqqqpmaapa
ygqpsaamgqnmrpmnqlypidlltelpppitdltlpppplvippermlvpselsnaspd
yirstlnavpknssllkksklpfglvirpyqhlydXcmetvmrargstglrmsrfyghff
nrssdlcafstmprdqsylfevnvdesimadycyvqvavllslnnsqrririitlamptt
eslaevyasa

Sequence, based on observed residues (ATOM records):

>d1m2vb2 b.2.8.1 (B:61-215,B:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fltpaqeqlhqqirpmnqlypidlltelpppitdltlpppplvippermlvpselsnasp
dyirstlnavpknssllkksklpfglvirpyqhlydXcmetvmrargstglrmsrfyghf
fnrssdlcafstmprdqsylfevnvdesimadycyvqvavllslnnsqrririitlampt
teslaevyasa

Timeline for d1m2vb2:

• d1m2vb2 first appeared in SCOP 1.63
  
• d1m2vb2 appears in SCOPe 2.07