Lineage for d1kp5a1 (1kp5 A:11-245)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2939772Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2939773Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2939774Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2939778Protein Green fluorescent protein, GFP [54513] (6 species)
  7. 2939786Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (285 PDB entries)
    Uniprot P42212
  8. 2940131Domain d1kp5a1: 1kp5 A:11-245 [72842]
    Other proteins in same PDB: d1kp5a2, d1kp5b2
    cyclic variant with linked natural termini
    complexed with so4

Details for d1kp5a1

PDB Entry: 1kp5 (more details), 2.6 Å

PDB Description: cyclic green fluorescent protein
PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d1kp5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kp5a1 d.22.1.1 (A:11-245) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
srkgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptl
vttfsygvqcfsrypdhmkrhdffksampegyvqertisfkddgnyktraevkfegdtlv
nrielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqlad
hyqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaaglvprgtg

SCOPe Domain Coordinates for d1kp5a1:

Click to download the PDB-style file with coordinates for d1kp5a1.
(The format of our PDB-style files is described here.)

Timeline for d1kp5a1:

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Domains from same chain:
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d1kp5a2