Lineage for d1qhda1 (1qhd A:1-148,A:333-397)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006205Fold a.115: A virus capsid protein alpha-helical domain [48344] (1 superfamily)
    multihelical; three-helical bundle in the core is surrounded by non-conserved helices
  4. 2006206Superfamily a.115.1: A virus capsid protein alpha-helical domain [48345] (3 families) (S)
    this domain is interrupted by a jelly-roll beta-sandwich domain
  5. 2006229Family a.115.1.2: vp6, the major capsid protein of group A rotavirus [63596] (1 protein)
  6. 2006230Protein vp6, the major capsid protein of group A rotavirus [63597] (2 species)
  7. 2006233Species Bovine rotavirus [TaxId:10927] [63598] (1 PDB entry)
  8. 2006234Domain d1qhda1: 1qhd A:1-148,A:333-397 [63324]
    Other proteins in same PDB: d1qhda2
    complexed with ca, cl, zn

Details for d1qhda1

PDB Entry: 1qhd (more details), 1.95 Å

PDB Description: crystal structure of vp6, the major capsid protein of group a rotavirus
PDB Compounds: (A:) viral capsid vp6

SCOPe Domain Sequences for d1qhda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1qhda1 a.115.1.2 (A:1-148,A:333-397) vp6, the major capsid protein of group A rotavirus {Bovine rotavirus [TaxId: 10927]}
mdvlyslsktlkdardkivegtlysnvsdliqqfnqmiitmngnefqtggignlpirnwn
fdfgllgttllnldanyvetarntidyfvdfvdnvcmdemvresqrngiapqsdslikls
gikfkrinfdnsseyienwnlqnrrqrtXsvladasetmlanvtsvrqeyaipvgpvfpp
gmnwtdlitnyspsrednlqrvftvasirsmlvk

SCOPe Domain Coordinates for d1qhda1:

Click to download the PDB-style file with coordinates for d1qhda1.
(The format of our PDB-style files is described here.)

Timeline for d1qhda1:

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Domains from same chain:
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d1qhda2