SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Class g: Small proteins

  1. Root: SCOP 1.55
  2. 39385Class g: Small proteins [56992] (54 folds)

Folds:

  1. 39386g.1: Insulin-like [56993] (1 superfamily)
  2. 39568g.2: Toxic hairpin [57006] (2 superfamilies)
  3. 39579g.3: Knottins (small inhibitors, toxins, lectins) [57015] (16 superfamilies)
  4. 40228g.4: Proteinase inhibitor PMP-C [57282] (1 superfamily)
  5. 40234g.5: Midkine [57287] (1 superfamily)
  6. 40244g.6: Amb V allergen [57295] (1 superfamily)
  7. 40254g.7: Snake toxin-like [57301] (1 superfamily)
  8. 40392g.8: BPTI-like [57361] (1 superfamily)
  9. 40525g.9: Defensin-like [57391] (1 superfamily)
  10. 40580g.10: Hairpin loop containing domain of hepatocyte growth factor [57413] (1 superfamily)
  11. 40590g.11: Neurotoxin III (ATX III) [57418] (1 superfamily)
  12. 40596g.12: Ligand-binding domain of low-density lipoprotein receptor [57423] (1 superfamily)
  13. 40610g.13: Crambin-like [57428] (1 superfamily)
  14. 40632g.14: Kringle-like [57439] (1 superfamily)
  15. 40708g.15: Ovomucoid/PCI-1 like inhibitors [57466] (1 superfamily)
  16. 40785g.16: Trefoil [57491] (1 superfamily)
  17. 40812g.17: Cystine-knot cytokines [57500] (1 superfamily)
  18. 40917g.18: Complement control module/SCR domain [57534] (1 superfamily)
  19. 40984g.19: Sea anemone toxin k [57545] (1 superfamily)
  20. 40994g.20: Blood coagulation inhibitor (disintegrin) [57551] (1 superfamily)
  21. 41006g.21: Methylamine dehydrogenase, L chain [57560] (1 superfamily)
  22. 41020g.22: Serine proterase inhibitors [57566] (1 superfamily)
  23. 41043g.23: TB module/8-cys domain [57580] (1 superfamily)
  24. 41049g.24: TNF receptor-like [57585] (1 superfamily)
  25. 41101g.25: Heparin-binding domain from vascular endothelial growth factor [57592] (1 superfamily)
  26. 41108g.26: Antifungal protein (AGAFP) [57597] (1 superfamily)
  27. 41114g.27: Fibronectin type I module [57602] (1 superfamily)
  28. 41131g.28: Thyroglobulin type-1 domain [57609] (1 superfamily)
  29. 41138g.29: Type X cellulose binding domain, CBDX [57614] (1 superfamily)
  30. 41145g.30: Carboxypeptidase inhibitor [57619] (1 superfamily)
  31. 41152g.31: Tachycitin [57624] (1 superfamily)
  32. 41158g.32: GLA-domain [57629] (1 superfamily)
  33. 41181g.33: Cholecystokinin A receptor, N-domain [57641] (1 superfamily)
  34. 41187g.34: HIV-1 VPU cytoplasmic domain [57646] (1 superfamily)
  35. 41193g.35: HIPIP (high potential iron protein) [57651] (1 superfamily)
  36. 41222g.36: Ferredoxin thioredoxin reductase (FTR), catalytic beta chain [57661] (1 superfamily)
  37. 41228g.37: C2H2 and C2HC zinc fingers [57666] (1 superfamily)
  38. 41340g.38: Zn2/Cys6 DNA-binding domain [57700] (1 superfamily)
  39. 41378g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
  40. 41478g.40: Retrovirus zinc finger-like domains [57755] (1 superfamily)
  41. 41508g.41: Rubredoxin-like [57769] (8 superfamilies)
  42. 41721g.42: Ribosomal protein L36 [57839] (1 superfamily)
  43. 41728g.43: B-box zinc-binding domain [57844] (1 superfamily)
  44. 41734g.44: RING finger domain, C3HC4 [57849] (1 superfamily)
  45. 41752g.45: Pyk2-associated protein beta ARF-GAP domain [57862] (1 superfamily)
  46. 41758g.46: Metallothionein [57867] (1 superfamily)
  47. 41789g.47: Zinc domain conserved in yeast copper-regulated transcription factors [57878] (1 superfamily)
  48. 41795g.48: Ada DNA repair protein, N-terminal domain (N-Ada 10) [57883] (1 superfamily)
  49. 41801g.49: Cysteine-rich domain [57888] (1 superfamily)
  50. 41823g.50: FYVE/PHD zinc finger [57902] (1 superfamily)
  51. 41842g.51: Zn-binding domains of ADDBP [57916] (1 superfamily)
  52. 41861g.52: Inhibitor of apoptosis (IAP) repeat [57923] (1 superfamily)
  53. 41879g.53: TAZ domain [57932] (1 superfamily)
  54. 41885g.54: Cysteine-rich domain of the chaperone protein DnaJ. [57937] (1 superfamily)

More info for Class g: Small proteins

Timeline for Class g: Small proteins: