SCOP 1.75: Protein: Queosine tRNA-guanine transglycosylase

Lineage for Protein: Queosine tRNA-guanine transglycosylase

Root: SCOP 1.75
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)
Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
Protein Queosine tRNA-guanine transglycosylase [51715] (1 species)
contains zinc-binding subdomain

Species:

Zymomonas mobilis [TaxId:542] [51716] (33 PDB entries)
Uniprot P28720
1. Domain for 1efz:
  - Domain d1efza_: 1efz A: [29659]
    complexed with prf, zn; mutant
2. Domain for 1enu:
  - Domain d1enua_: 1enu A: [29660]
    complexed with apz, zn
3. Domain for 1f3e:
  - Domain d1f3ea_: 1f3e A: [29661]
    complexed with dpz, zn
4. Domain for 1k4g:
  - Domain d1k4ga_: 1k4g A: [72054]
    complexed with aiq, zn
5. Domain for 1k4h:
  - Domain d1k4ha_: 1k4h A: [72055]
    complexed with apq, zn
6. Domain for 1n2v:
  - Domain d1n2va_: 1n2v A: [85288]
    complexed with bdi, zn
7. Domain for 1ozm:
  - Domain d1ozma_: 1ozm A: [93850]
    complexed with zn; mutant
8. Domain for 1ozq:
  - Domain d1ozqa_: 1ozq A: [93854]
    complexed with prf, zn; mutant
9. Domain for 1p0b:
  - Domain d1p0ba_: 1p0b A: [93863]
    complexed with pq0, zn
10. Domain for 1p0d:
  - Domain d1p0da_: 1p0d A: [93864]
    complexed with zn
11. Domain for 1p0e:
  - Domain d1p0ea_: 1p0e A: [93865]
    complexed with prf, zn
12. Domain for 1pud:
  - Domain d1puda_: 1pud A: [29658]
    complexed with zn
13. Domain for 1pxg:
  - Domain d1pxga_: 1pxg A: [95287]
    complexed with gol, prf, zn; mutant
14. Domains for 1q2r:
  1. Domain d1q2ra_: 1q2r A: [95634]
  2. Domain d1q2rb_: 1q2r B: [95635]
  3. Domain d1q2rc_: 1q2r C: [95636]
  4. Domain d1q2rd_: 1q2r D: [95637]
    complexed with 9dg, rob, zn
15. Domains for 1q2s:
  1. Domain d1q2sa_: 1q2s A: [95638]
  2. Domain d1q2sb_: 1q2s B: [95639]
  3. Domain d1q2sc_: 1q2s C: [95640]
  4. Domain d1q2sd_: 1q2s D: [95641]
    complexed with 9dg, pq1, rob, zn
16. Domain for 1q4w:
  - Domain d1q4wa_: 1q4w A: [95832]
    complexed with dqu, zn
17. Domain for 1q63:
  - Domain d1q63a_: 1q63 A: [95957]
    complexed with aiq, zn
18. Domain for 1q65:
  - Domain d1q65a_: 1q65 A: [95958]
    complexed with bhb, zn
19. Domain for 1q66:
  - Domain d1q66a_: 1q66 A: [95959]
    complexed with kmb, zn
20. Domain for 1r5y:
  - Domain d1r5ya_: 1r5y A: [97134]
    complexed with dqu, zn
21. Domain for 1s38:
  - Domain d1s38a_: 1s38 A: [105234]
    complexed with maq, zn
22. Domain for 1s39:
  - Domain d1s39a_: 1s39 A: [112010]
    complexed with aqo, zn
23. Domain for 1wkd:
  - Domain d1wkda_: 1wkd A: [29664]
    complexed with zn; mutant
24. Domain for 1wke:
  - Domain d1wkea_: 1wke A: [29663]
    complexed with zn; mutant
25. Domain for 1wkf:
  - Domain d1wkfa_: 1wkf A: [29662]
    complexed with zn; mutant
26. Domain for 1y5v:
  - Domain d1y5va1: 1y5v A:11-382 [122653]
    automatically matched to d1q2ra_
    complexed with gol, ne8, zn
27. Domain for 1y5w:
  - Domain d1y5wa1: 1y5w A:11-382 [122654]
    automatically matched to d1q2ra_
    complexed with gol, nez, zn
28. Domains for 1y5x:
  1. Domain d1y5xa1: 1y5x A:11-382 [122655]
    automatically matched to d1q2ra_
    complexed with e89, zn
  2. Domain d1y5xd1: 1y5x D:1011-1382 [122656]
    automatically matched to d1q2ra_
    complexed with e89, zn
29. Domain for 2bbf:
  - Domain d2bbfa1: 2bbf A:11-382 [128265]
    automatically matched to d1q2ra_
    complexed with 344, zn
30. Domain for 2pwu:
  - Domain d2pwua1: 2pwu A:11-383 [149904]
    automatically matched to d1q2ra_
    complexed with gol, gun, zn
31. Domain for 2qii:
  - Domain d2qiia1: 2qii A:11-383 [150810]
    automatically matched to d1q2ra_
    complexed with gol, pq0, zn
32. Domain for 2qzr:
  - Domain d2qzra1: 2qzr A:11-382 [151491]
    automatically matched to d1q2ra_
    complexed with gol, s79, zn
33. Domain for 2z7k:
  - Domain d2z7ka1: 2z7k A:11-382 [154198]
    automatically matched to d1q2ra_
    complexed with bgu, gol, zn

More info for Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase

Timeline for Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase:

Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase first appeared (with stable ids) in SCOP 1.55, called Protein tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase
Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase appears in SCOP 1.73
Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase appears in SCOPe 2.01
Protein Queosine tRNA-guanine transglycosylase from c.1.20.1: tRNA-guanine transglycosylase appears in the current release, SCOPe 2.08