Lineage for d1y5xd1 (1y5x D:1011-1382)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 814174Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 819122Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 819123Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
  6. 819134Protein Queosine tRNA-guanine transglycosylase [51715] (1 species)
    contains zinc-binding subdomain
  7. 819135Species Zymomonas mobilis [TaxId:542] [51716] (33 PDB entries)
    Uniprot P28720
  8. 819164Domain d1y5xd1: 1y5x D:1011-1382 [122656]
    automatically matched to d1q2ra_
    complexed with e89, zn

Details for d1y5xd1

PDB Entry: 1y5x (more details), 2.1 Å

PDB Description: trna-guanine transglycosylase (tgt) in complex with 6-amino-4-[2-(4- methoxyphenyl)ethyl]-1,7-dihydro-8h-imidazo[4,5-g]quinazolin-8-one
PDB Compounds: (D:) Queuine tRNA-ribosyltransferase

SCOP Domain Sequences for d1y5xd1:

Sequence, based on SEQRES records: (download)

>d1y5xd1 c.1.20.1 (D:1011-1382) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryf

Sequence, based on observed residues (ATOM records): (download)

>d1y5xd1 c.1.20.1 (D:1011-1382) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtgadiilgntyhlmlrpgaeriak
lgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfksrhmlspersieiqhllgsd
ivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgiqqgsvfenl
rqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmgvgkpddivg
avergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechcavcqkwsray
ihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfraryf

SCOP Domain Coordinates for d1y5xd1:

Click to download the PDB-style file with coordinates for d1y5xd1.
(The format of our PDB-style files is described here.)

Timeline for d1y5xd1: