Lineage for Family b.60.1.1: Retinol binding protein-like

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2062521Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2062522Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 2062523Family b.60.1.1: Retinol binding protein-like [50815] (22 protein domains)
    barrel, closed; n=8, S=12, meander

Protein Domains:

  1. 2062524Alpha-crustacyanin [63807] (1 species)
  2. 2062540Aphrodisin, a sex pheromone [63805] (1 species)
  3. 2062546beta-Lactoglobulin [50827] (4 species)
    1. 2062547Species Cow (Bos taurus) [TaxId:9913] [50828] (56 PDB entries)
      Uniprot P02754
    2. 2062606Species Goat (Capra hircus) [TaxId:9925] [267757] (2 PDB entries)
    3. 2062610Species Pig (Sus scrofa) [TaxId:9823] [50829] (1 PDB entry)
    4. 2062612Species Reindeer (Rangifer tarandus) [TaxId:9870] [141461] (1 PDB entry)
      Uniprot P02755 19-180
  4. 2062616Bilin-binding protein [50837] (1 species)
  5. 2062628Complement protein C8gamma [74998] (1 species)
  6. 2062632Histamine binding protein [50839] (1 species)
  7. 2062638Hypothetical protein YxeF [159228] (1 species)
  8. 2062641Insecticyanin [141462] (1 species)
  9. 2062644Lipocalin allergen [50824] (2 species)
    1. 2062645Species Cow (Bos taurus), bos d 2 [TaxId:9913] [50825] (3 PDB entries)
    2. 2062649Species Horse (Equus caballus), equ c 1 [TaxId:9796] [50826] (1 PDB entry)
  10. 2062651Lipocalin q83 [89364] (2 species)
    activated expression by the myc oncogene
    1. 2062652Species Common quail (Coturnix coturnix) [TaxId:9091] [89365] (1 PDB entry)
    2. 2062654Species Coturnix japonica [TaxId:93934] [255375] (2 PDB entries)
  11. 2062657Major urinary protein/alpha-2u-globulin [50832] (2 species)
    1. 2062658Species Mouse (Mus musculus) [TaxId:10090] [50833] (19 PDB entries)
    2. 2062678Species Norway rat (Rattus norvegicus) [TaxId:10116] [50834] (2 PDB entries)
  12. 2062687Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  13. 2062792Nitrophorin 1 [50841] (1 species)
  14. 2062806Nitrophorin 2 (prolixin-s) [50843] (1 species)
  15. 2062822Nitrophorin 4 [50845] (1 species)
  16. 2062872Odorant-binding protein [50821] (2 species)
    C-termini swapping dimer
    1. 2062873Species Cow (Bos taurus) [TaxId:9913] [50822] (8 PDB entries)
    2. 2062890Species Pig (Sus scrofa) [TaxId:9823] [50823] (9 PDB entries)
  17. 2062908Outer membrane lipoprotein Blc [101861] (1 species)
    bacterial lipocalin
  18. 2062912Retinoic acid-binding protein [50830] (1 species)
  19. 2062918Retinol binding protein [50816] (5 species)
    1. 2062919Species Chicken (Gallus gallus) [TaxId:9031] [50820] (1 PDB entry)
    2. 2062922Species Chicken (Gallus gallus), plasma isoform [TaxId:9031] [69297] (1 PDB entry)
    3. 2062924Species Cow (Bos taurus) [TaxId:9913] [50817] (11 PDB entries)
    4. 2062936Species Human (Homo sapiens) [TaxId:9606] [50819] (9 PDB entries)
    5. 2062948Species Pig (Sus scrofa) [TaxId:9823] [50818] (1 PDB entry)
  20. 2062950Salivary lipocalin [74996] (1 species)
  21. 2062953Von Ebner's gland protein (VEGP, tear lipocalin) [117265] (1 species)
  22. 2062960automated matches [190163] (13 species)
    not a true protein
    1. 2062961Species American lobster (Homarus americanus) [TaxId:6706] [194849] (1 PDB entry)
    2. 2062964Species Brown ear tick (Rhipicephalus appendiculatus) [TaxId:34631] [189209] (2 PDB entries)
    3. 2062969Species Chicken (Gallus gallus) [TaxId:9031] [189846] (1 PDB entry)
    4. 2062972Species Cow (Bos taurus) [TaxId:9913] [188392] (1 PDB entry)
    5. 2062974Species Escherichia coli [TaxId:562] [187394] (1 PDB entry)
    6. 2062977Species Goat (Capra hircus) [TaxId:9925] [257696] (2 PDB entries)
    7. 2062983Species Horse (Equus caballus) [TaxId:9796] [189576] (1 PDB entry)
    8. 2062986Species Human (Homo sapiens) [TaxId:9606] [188452] (13 PDB entries)
    9. 2063013Species Mouse (Mus musculus) [TaxId:10090] [188249] (10 PDB entries)
    10. 2063025Species Norway rat (Rattus norvegicus) [TaxId:10116] [237753] (2 PDB entries)
    11. 2063031Species Reindeer (Rangifer tarandus) [TaxId:9870] [186888] (1 PDB entry)
    12. 2063037Species Rhodnius prolixus [TaxId:13249] [187425] (3 PDB entries)
    13. 2063043Species Sheep (Ovis aries) [TaxId:9940] [237679] (4 PDB entries)

More info for Family b.60.1.1: Retinol binding protein-like

Timeline for Family b.60.1.1: Retinol binding protein-like: