Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander
  6. Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [50836] (49 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1dfv:
    1. Domain d1dfva_: 1dfv A: [27144]
      complexed with nag, so4
    2. Domain d1dfvb_: 1dfv B: [27145]
      complexed with nag, so4
  2. Domain(s) for 1l6m:
    1. Domain d1l6ma_: 1l6m A: [84531]
      complexed with dbh, dbs, fe, so4
    2. Domain d1l6mb_: 1l6m B: [84532]
      complexed with dbh, dbs, fe, so4
    3. Domain d1l6mc_: 1l6m C: [84533]
      complexed with dbh, dbs, fe, so4
  3. Domain(s) for 1ngl:
  4. Domain(s) for 1qqs:
  5. Domain(s) for 1x71:
    1. Domain d1x71a_: 1x71 A: [121768]
      automated match to d1ngla_
      complexed with db1, fe
    2. Domain d1x71b_: 1x71 B: [121769]
      automated match to d1ngla_
      complexed with db1, fe
    3. Domain d1x71c_: 1x71 C: [121770]
      automated match to d1ngla_
      complexed with db1, fe
  6. Domain(s) for 1x89:
    1. Domain d1x89a_: 1x89 A: [121799]
      automated match to d1ngla_
      complexed with cm1
    2. Domain d1x89b_: 1x89 B: [121800]
      automated match to d1ngla_
      complexed with cm1
    3. Domain d1x89c_: 1x89 C: [121801]
      automated match to d1ngla_
      complexed with cm1
  7. Domain(s) for 1x8u:
    1. Domain d1x8ua_: 1x8u A: [121807]
      automated match to d1ngla_
      complexed with cm2
    2. Domain d1x8ub_: 1x8u B: [121808]
      automated match to d1ngla_
      complexed with cm2
    3. Domain d1x8uc_: 1x8u C: [121809]
      automated match to d1ngla_
      complexed with cm2
  8. Domain(s) for 3by0:
    1. Domain d3by0a_: 3by0 A: [208742]
      automated match to d4iawa_
      complexed with dbh, dbs, fe, gol, so4
    2. Domain d3by0b_: 3by0 B: [208743]
      automated match to d4iawa_
      complexed with dbh, dbs, fe, gol, so4
    3. Domain d3by0c_: 3by0 C: [208744]
      automated match to d4iawa_
      complexed with dbh, dbs, fe, gol, so4
  9. Domain(s) for 3cbc:
    1. Domain d3cbca_: 3cbc A: [208848]
      automated match to d4iawa_
      complexed with dbs, gol, na, so4
    2. Domain d3cbcb_: 3cbc B: [208849]
      automated match to d4iawa_
      complexed with dbs, gol, na, so4
    3. Domain d3cbcc_: 3cbc C: [208850]
      automated match to d4iawa_
      complexed with dbs, gol, na, so4
  10. Domain(s) for 3cmp:
    1. Domain d3cmpa_: 3cmp A: [208903]
      automated match to d4iawa_
      complexed with dbh, eb4, fe, gol, na, so4; mutant
    2. Domain d3cmpb_: 3cmp B: [208904]
      automated match to d4iawa_
      complexed with dbh, eb4, fe, gol, na, so4; mutant
    3. Domain d3cmpc_: 3cmp C: [208905]
      automated match to d4iawa_
      complexed with dbh, eb4, fe, gol, na, so4; mutant
  11. Domain(s) for 3dtq:
    1. Domain d3dtqa_: 3dtq A: [174220]
      automated match to d1ngla_
    2. Domain d3dtqb_: 3dtq B: [174221]
      automated match to d1ngla_
    3. Domain d3dtqc_: 3dtq C: [174222]
      automated match to d1ngla_
  12. Domain(s) for 3fw4:
    1. Domain d3fw4a_: 3fw4 A: [176094]
      automated match to d1ngla_
      complexed with caq, cl, fe, gol, na
    2. Domain d3fw4b_: 3fw4 B: [176095]
      automated match to d1ngla_
      complexed with caq, cl, fe, gol, na
    3. Domain d3fw4c_: 3fw4 C: [176096]
      automated match to d1ngla_
      complexed with caq, cl, fe, gol, na
  13. Domain(s) for 3fw5:
    1. Domain d3fw5a_: 3fw5 A: [176097]
      automated match to d1ngla_
      complexed with cl, fe, gol, mct, na
    2. Domain d3fw5b_: 3fw5 B: [176098]
      automated match to d1ngla_
      complexed with cl, fe, gol, mct, na
    3. Domain d3fw5c_: 3fw5 C: [176099]
      automated match to d1ngla_
      complexed with cl, fe, gol, mct, na
  14. Domain(s) for 3hwd:
    1. Domain d3hwda_: 3hwd A: [211315]
      automated match to d4iawa_
      complexed with na; mutant
    2. Domain d3hwdb_: 3hwd B: [211316]
      automated match to d4iawa_
      complexed with na; mutant
    3. Domain d3hwdc_: 3hwd C: [211317]
      automated match to d4iawa_
      complexed with na; mutant
  15. Domain(s) for 3hwe:
    1. Domain d3hwea_: 3hwe A: [211318]
      automated match to d4iawa_
      complexed with fe, gol, na, rks, so4
    2. Domain d3hweb_: 3hwe B: [211319]
      automated match to d4iawa_
      complexed with fe, gol, na, rks, so4
    3. Domain d3hwec_: 3hwe C: [211320]
      automated match to d4iawa_
      complexed with fe, gol, na, rks, so4
  16. Domain(s) for 3hwg:
    1. Domain d3hwga_: 3hwg A: [211321]
      automated match to d4iawa_
      complexed with cl, fe, gol, na, qed, so4
    2. Domain d3hwgb_: 3hwg B: [211322]
      automated match to d4iawa_
      complexed with cl, fe, gol, na, qed, so4
    3. Domain d3hwgc_: 3hwg C: [211323]
      automated match to d4iawa_
      complexed with cl, fe, gol, na, qed, so4
  17. Domain(s) for 3i0a:
    1. Domain d3i0aa_: 3i0a A: [211414]
      automated match to d4iawa_
      complexed with 2ds, 3et, dbh, fe, gol, mcj, so4; mutant
    2. Domain d3i0ab_: 3i0a B: [211415]
      automated match to d4iawa_
      complexed with 2ds, 3et, dbh, fe, gol, mcj, so4; mutant
    3. Domain d3i0ac_: 3i0a C: [211416]
      automated match to d4iawa_
      complexed with 2ds, 3et, dbh, fe, gol, mcj, so4; mutant
  18. Domain(s) for 3k3l:
    1. Domain d3k3la_: 3k3l A: [179044]
      automated match to d1ngla_
      complexed with cl, dbh, dbs, gol, mck, na, so4
    2. Domain d3k3lb_: 3k3l B: [179045]
      automated match to d1ngla_
      complexed with cl, dbh, dbs, gol, mck, na, so4
    3. Domain d3k3lc_: 3k3l C: [179046]
      automated match to d1ngla_
      complexed with cl, dbh, dbs, gol, mck, na, so4
  19. Domain(s) for 3pec:
    1. Domain d3peca_: 3pec A: [183679]
      automated match to d1ngla_
      complexed with fe, gol, na, so4, zyg
    2. Domain d3pecb_: 3pec B: [183680]
      automated match to d1ngla_
      complexed with fe, gol, na, so4, zyg
    3. Domain d3pecc_: 3pec C: [183681]
      automated match to d1ngla_
      complexed with fe, gol, na, so4, zyg
  20. Domain(s) for 3ped:
    1. Domain d3peda_: 3ped A: [183682]
      automated match to d1ngla_
      complexed with fe, so4, zyf
    2. Domain d3pedb_: 3ped B: [183683]
      automated match to d1ngla_
      complexed with fe, so4, zyf
    3. Domain d3pedc_: 3ped C: [183684]
      automated match to d1ngla_
      complexed with fe, so4, zyf
  21. Domain(s) for 3t1d:
    1. Domain d3t1da_: 3t1d A: [216639]
      automated match to d4iawa_
      complexed with cl, dbh, dbs, gol, td1, unx; mutant
    2. Domain d3t1db_: 3t1d B: [216640]
      automated match to d4iawa_
      complexed with cl, dbh, dbs, gol, td1, unx; mutant
    3. Domain d3t1dc_: 3t1d C: [216641]
      automated match to d4iawa_
      complexed with cl, dbh, dbs, gol, td1, unx; mutant
  22. Domain(s) for 3tf6:
    1. Domain d3tf6a_: 3tf6 A: [200808]
      automated match to d3tf6c_
      complexed with cl, dbh, eu, gol, so4; mutant
    2. Domain d3tf6b_: 3tf6 B: [200809]
      automated match to d3tf6c_
      complexed with cl, dbh, eu, gol, so4; mutant
    3. Domain d3tf6c_: 3tf6 C: [196179]
      automated match to d1ngla_
      complexed with cl, dbh, eu, gol, so4; mutant
  23. Domain(s) for 3u0d:
    1. Domain d3u0da_: 3u0d A: [217121]
      automated match to d4iawa_
      complexed with cl, dbh, fe
    2. Domain d3u0db_: 3u0d B: [217122]
      automated match to d4iawa_
      complexed with cl, dbh, fe
    3. Domain d3u0dc_: 3u0d C: [217123]
      automated match to d4iawa_
      complexed with cl, dbh, fe
    4. Domain d3u0dd_: 3u0d D: [217124]
      automated match to d4iawa_
      complexed with cl, dbh, fe
  24. Domain(s) for 4gh7:
    1. Domain d4gh7a_: 4gh7 A: [196773]
      automated match to d3dtqc_
    2. Domain d4gh7c_: 4gh7 C: [196774]
      automated match to d3dtqc_
  25. Domain(s) for 4iaw:
    1. Domain d4iawa1: 4iaw A:1-178 [197402]
      Other proteins in same PDB: d4iawa2
      automated match to d3dtqc_
      complexed with liz, yt3
    2. Domain d4iawb_: 4iaw B: [202601]
      Other proteins in same PDB: d4iawa2
      automated match to d4iawa_
      complexed with liz, yt3
    3. Domain d4iawc_: 4iaw C: [202602]
      Other proteins in same PDB: d4iawa2
      automated match to d4iawa_
      complexed with liz, yt3
  26. Domain(s) for 4iax:
  27. Domain(s) for 4k19:
    1. Domain d4k19a_: 4k19 A: [227580]
      automated match to d1l6ma_
      complexed with 1od, cl, fe, gol, na, so4
    2. Domain d4k19b_: 4k19 B: [227581]
      automated match to d1l6ma_
      complexed with 1od, cl, fe, gol, na, so4
    3. Domain d4k19c_: 4k19 C: [227582]
      automated match to d1l6ma_
      complexed with 1od, cl, fe, gol, na, so4
  28. Domain(s) for 4zfx:
    1. Domain d4zfxa_: 4zfx A: [275765]
      automated match to d1l6ma_
      complexed with eb4, so4, th
    2. Domain d4zfxb_: 4zfx B: [275764]
      automated match to d1l6ma_
      complexed with eb4, so4, th
    3. Domain d4zfxc_: 4zfx C: [275766]
      automated match to d1l6ma_
      complexed with eb4, so4, th
  29. Domain(s) for 4zhc:
    1. Domain d4zhca_: 4zhc A: [275789]
      automated match to d1l6ma_
      complexed with act, so4, tc2, th
    2. Domain d4zhcb_: 4zhc B: [275783]
      automated match to d1l6ma_
      complexed with act, so4, tc2, th
    3. Domain d4zhcc_: 4zhc C: [275790]
      automated match to d1l6ma_
      complexed with act, so4, tc2, th
  30. Domain(s) for 4zhd:
    1. Domain d4zhda_: 4zhd A: [275767]
      automated match to d1l6ma_
      complexed with 4oz, 4pu, gol, so4
    2. Domain d4zhdb_: 4zhd B: [275769]
      automated match to d1l6ma_
      complexed with 4oz, 4pu, gol, so4
    3. Domain d4zhdc_: 4zhd C: [275768]
      automated match to d1l6ma_
      complexed with 4oz, 4pu, gol, so4
  31. Domain(s) for 4zhf:
    1. Domain d4zhfa_: 4zhf A: [275771]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
    2. Domain d4zhfb_: 4zhf B: [275780]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
    3. Domain d4zhfc_: 4zhf C: [275788]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
    4. Domain d4zhfd_: 4zhf D: [275779]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
    5. Domain d4zhfe_: 4zhf E: [275782]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
    6. Domain d4zhff_: 4zhf F: [275784]
      automated match to d1l6ma_
      complexed with 4ol, gol, so4, zcm
  32. Domain(s) for 4zhg:
    1. Domain d4zhga_: 4zhg A: [275772]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
    2. Domain d4zhgb_: 4zhg B: [275776]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
    3. Domain d4zhgc_: 4zhg C: [275773]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
    4. Domain d4zhgd_: 4zhg D: [275774]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
    5. Domain d4zhge_: 4zhg E: [275775]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
    6. Domain d4zhgf_: 4zhg F: [275770]
      automated match to d1l6ma_
      complexed with 4ol, am, cl, gol, so4
  33. Domain(s) for 4zhh:
    1. Domain d4zhha_: 4zhh A: [275778]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
    2. Domain d4zhhb_: 4zhh B: [275786]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
    3. Domain d4zhhc_: 4zhh C: [275785]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
    4. Domain d4zhhd_: 4zhh D: [275787]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
    5. Domain d4zhhe_: 4zhh E: [275777]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
    6. Domain d4zhhf_: 4zhh F: [275781]
      automated match to d1l6ma_
      complexed with 4ol, cl, gol, sm, so4
  34. Domain(s) for 5jr8:
    1. Domain d5jr8a_: 5jr8 A: [323394]
      automated match to d1ngla_
      complexed with gol, po4; mutant
    2. Domain d5jr8b_: 5jr8 B: [323427]
      automated match to d1ngla_
      complexed with gol, po4; mutant
  35. Domain(s) for 5khp:
    1. Domain d5khpa_: 5khp A: [333389]
      automated match to d1l6ma_
      complexed with 7k9, gol, so4, zr
    2. Domain d5khpb_: 5khp B: [333683]
      automated match to d1l6ma_
      complexed with 7k9, gol, so4, zr
    3. Domain d5khpc_: 5khp C: [333676]
      automated match to d1l6ma_
      complexed with 7k9, gol, so4, zr
  36. Domain(s) for 5kic:
    1. Domain d5kica_: 5kic A: [333612]
      automated match to d1ngla_
      complexed with 4ol, cf, cl, so4
    2. Domain d5kicb_: 5kic B: [333467]
      automated match to d1ngla_
      complexed with 4ol, cf, cl, so4
    3. Domain d5kicc_: 5kic C: [333658]
      automated match to d1ngla_
      complexed with 4ol, cf, cl, so4
  37. Domain(s) for 5kid:
    1. Domain d5kida_: 5kid A: [333447]
      automated match to d1l6ma_
      complexed with 7k9, cl, gol, so4, th
    2. Domain d5kidb_: 5kid B: [333618]
      automated match to d1l6ma_
      complexed with 7k9, cl, gol, so4, th
    3. Domain d5kidc_: 5kid C: [333395]
      automated match to d1l6ma_
      complexed with 7k9, cl, gol, so4, th
  38. Domain(s) for 5mhh:
  39. Domain(s) for 5n47:
    1. Domain d5n47a1: 5n47 A:3-178 [346941]
      Other proteins in same PDB: d5n47a2
      automated match to d1ngla_
    2. Domain d5n47c_: 5n47 C: [346815]
      Other proteins in same PDB: d5n47a2
      automated match to d1ngla_
    3. Domain d5n47e_: 5n47 E: [346872]
      Other proteins in same PDB: d5n47a2
      automated match to d1ngla_
  40. Domain(s) for 5n48:
    1. Domain d5n48a_: 5n48 A: [346740]
      Other proteins in same PDB: d5n48b_, d5n48d1, d5n48d2
      automated match to d1ngla_
    2. Domain d5n48c_: 5n48 C: [346746]
      Other proteins in same PDB: d5n48b_, d5n48d1, d5n48d2
      automated match to d1ngla_
  41. Domain(s) for 5nkn:
  42. Domain(s) for 6gqz:
    1. Domain d6gqza_: 6gqz A: [356096]
      automated match to d4gh7a_
    2. Domain d6gqzb_: 6gqz B: [356060]
      automated match to d4gh7a_
  43. Domain(s) for 6gr0:
    1. Domain d6gr0a_: 6gr0 A: [356062]
      automated match to d4gh7a_
      complexed with f8w, ga
    2. Domain d6gr0b_: 6gr0 B: [356064]
      automated match to d4gh7a_
      complexed with f8w, ga
    3. Domain d6gr0c_: 6gr0 C: [356068]
      automated match to d4gh7a_
      complexed with f8w, ga
  44. Domain(s) for 6o5d:
    1. Domain d6o5da_: 6o5d A: [373981]
      automated match to d3tf6a_
      complexed with gol, so4
    2. Domain d6o5db_: 6o5d B: [373977]
      automated match to d3tf6a_
      complexed with gol, so4
    3. Domain d6o5dc_: 6o5d C: [374006]
      automated match to d3tf6a_
      complexed with gol, so4
  45. Domain(s) for 6qmu:
    1. Domain d6qmua1: 6qmu A:5-178 [373570]
      Other proteins in same PDB: d6qmua2, d6qmub2
      automated match to d1ngla_
      complexed with zcq
    2. Domain d6qmub1: 6qmu B:5-178 [373508]
      Other proteins in same PDB: d6qmua2, d6qmub2
      automated match to d1ngla_
      complexed with zcq
  46. Domain(s) for 6s8v:
    1. Domain d6s8va_: 6s8v A: [381846]
      Other proteins in same PDB: d6s8vc2
      automated match to d1ngla_
      complexed with edo
    2. Domain d6s8vc1: 6s8v C:8-178 [381843]
      Other proteins in same PDB: d6s8vc2
      automated match to d1ngla_
      complexed with edo
  47. Domain(s) for 6sua:
    1. Domain d6suaa_: 6sua A: [387865]
      automated match to d1ngla_
      complexed with so4
    2. Domain d6suac_: 6sua C: [387862]
      automated match to d1ngla_
      complexed with so4
  48. Domain(s) for 6z2c:
    1. Domain d6z2ca1: 6z2c A:3-178 [407378]
      Other proteins in same PDB: d6z2ca2, d6z2cb2
      automated match to d1ngla_
      complexed with q5e
    2. Domain d6z2cb1: 6z2c B:3-178 [407381]
      Other proteins in same PDB: d6z2ca2, d6z2cb2
      automated match to d1ngla_
      complexed with q5e
    3. Domain d6z2cc_: 6z2c C: [407409]
      Other proteins in same PDB: d6z2ca2, d6z2cb2
      automated match to d1ngla_
      complexed with q5e
  49. Domain(s) for 6z6z:

More info for Species Human (Homo sapiens) [TaxId:9606] from b.60.1.1 Neutrophil gelatinase-associated lipocalin (NGAL)

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.60.1.1 Neutrophil gelatinase-associated lipocalin (NGAL):