Lineage for Superfamily b.60.1: Lipocalins

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2062521Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2062522Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior


  1. 2062523b.60.1.1: Retinol binding protein-like [50815] (22 protein domains)
    barrel, closed; n=8, S=12, meander
  2. 2063049b.60.1.2: Fatty acid binding protein-like [50847] (18 protein domains)
    ten-stranded meander beta-sheet folded upon itself
    relates to the common fold by opening the barrel and insertion of beta-hairpin
  3. 2063400b.60.1.3: Thrombin inhibitor [50872] (1 protein)
    topology permutation: strands 2 and 3 swapped their positions in the barrel
    automatically mapped to Pfam PF03973
  4. 2063404b.60.1.4: Hypothetical protein YodA [101863] (2 protein domains)
    bacterial metal-binding, lipocalin-like protein
    automatically mapped to Pfam PF09223
  5. 2063419b.60.1.5: Hypothetical protein YwiB [101866] (1 protein)
    bacterial proteins with a fatty acid binding protein-like fold
    automatically mapped to Pfam PF09148
  6. 2063423b.60.1.6: Phenolic acid decarboxylase (PAD) [141469] (2 protein domains)
    Pfam PF05870; dimeric enzyme made of lipocalin-like subunits
  7. 2063448b.60.1.7: Dinoflagellate luciferase repeat [141472] (1 protein)
    PfamB PB017809; comprises a fatty acid binding protein-like fold, wrapped into the extra N- and C-terminal 'tails'
  8. 2063452b.60.1.8: Rv2717c-like [141475] (3 protein domains)
    bacterial and plant proteins with a fatty acid binding protein-like fold
    automatically mapped to Pfam PF08768
  9. 2063474b.60.1.9: All1756-like [159230] (1 protein)
    cyanobacterial proteins with duplicated fatty acid binding protein-like domains; N-terminal and C-terminal domains correspond to PfamB 40396 and PfamB 60468, respectively
  10. 2063481b.60.1.0: automated matches [191454] (1 protein)
    not a true family

More info for Superfamily b.60.1: Lipocalins

Timeline for Superfamily b.60.1: Lipocalins: