SCOPe 2.04: Protein: ssDNA-binding protein

Lineage for Protein: ssDNA-binding protein

Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds)
Fold b.40: OB-fold [50198] (16 superfamilies)
barrel, closed or partly opened n=5, S=10 or S=8; greek-key
Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)
Family b.40.4.3: Single strand DNA-binding domain, SSB [50263] (13 proteins)
barrel, closed; n=5, S=10
Protein ssDNA-binding protein [50264] (4 species)

Species:

Deinococcus radiodurans [TaxId:1299] [110194] (1 PDB entry)
Uniprot Q9RY51
- Domain for 1se8:
  - Domain d1se8a_: 1se8 A: [105448]
Escherichia coli [TaxId:562] [50266] (6 PDB entries)
Uniprot P02339
1. Domains for 1eqq:
  1. Domain d1eqqa_: 1eqq A: [90461]
    complexed with ssDNA
    protein/DNA complex; protein/RNA complex
  2. Domain d1eqqb_: 1eqq B: [90462]
    complexed with ssDNA
    protein/DNA complex; protein/RNA complex
  3. Domain d1eqqc_: 1eqq C: [90463]
    complexed with ssDNA
    protein/DNA complex; protein/RNA complex
  4. Domain d1eqqd_: 1eqq D: [90464]
    complexed with ssDNA
    protein/DNA complex; protein/RNA complex
2. Domains for 1eyg:
  1. Domain d1eyga_: 1eyg A: [25292]
    protein/DNA complex
  2. Domain d1eygb_: 1eyg B: [25293]
    protein/DNA complex
  3. Domain d1eygc_: 1eyg C: [25294]
    protein/DNA complex
  4. Domain d1eygd_: 1eyg D: [25295]
    protein/DNA complex
3. Domains for 1kaw:
  1. Domain d1kawa_: 1kaw A: [25288]
  2. Domain d1kawb_: 1kaw B: [25289]
  3. Domain d1kawc_: 1kaw C: [25290]
  4. Domain d1kawd_: 1kaw D: [25291]
4. Domains for 1qvc:
  1. Domain d1qvca_: 1qvc A: [25284]
  2. Domain d1qvcb_: 1qvc B: [25285]
  3. Domain d1qvcc_: 1qvc C: [25286]
  4. Domain d1qvcd_: 1qvc D: [25287]
5. Domains for 1sru:
  1. Domain d1srua_: 1sru A: [105971]
  2. Domain d1srub_: 1sru B: [105972]
  3. Domain d1sruc_: 1sru C: [105973]
  4. Domain d1srud_: 1sru D: [105974]
6. Domains for 4mz9:
  1. Domain d4mz9a_: 4mz9 A: [229921]
    automated match to d1eqqa_
  2. Domain d4mz9b_: 4mz9 B: [229922]
    automated match to d1eqqa_
  3. Domain d4mz9c_: 4mz9 C: [229924]
    automated match to d1eqqa_
  4. Domain d4mz9d_: 4mz9 D: [229923]
    automated match to d1eqqa_
Human (Homo sapiens), mitochondria [TaxId:9606] [50265] (2 PDB entries)
Uniprot Q04837
1. Domains for 1s3o:
  1. Domain d1s3oa_: 1s3o A: [105247]
  2. Domain d1s3ob_: 1s3o B: [105248]
2. Domains for 3ull:
  1. Domain d3ulla_: 3ull A: [25282]
  2. Domain d3ullb_: 3ull B: [25283]
Mycobacterium tuberculosis [TaxId:1773] [101760] (4 PDB entries)
1. Domains for 1ue1:
  1. Domain d1ue1a_: 1ue1 A: [99243]
    complexed with zn
  2. Domain d1ue1b_: 1ue1 B: [99244]
    complexed with zn
2. Domains for 1ue5:
  1. Domain d1ue5a_: 1ue5 A: [99245]
    complexed with cd
  2. Domain d1ue5b_: 1ue5 B: [99246]
    complexed with cd
3. Domains for 1ue6:
  1. Domain d1ue6a_: 1ue6 A: [99247]
  2. Domain d1ue6b_: 1ue6 B: [99248]
  3. Domain d1ue6c_: 1ue6 C: [99249]
  4. Domain d1ue6d_: 1ue6 D: [99250]
4. Domains for 1ue7:
  1. Domain d1ue7a_: 1ue7 A: [99251]
  2. Domain d1ue7b_: 1ue7 B: [99252]
  3. Domain d1ue7c_: 1ue7 C: [99253]
  4. Domain d1ue7d_: 1ue7 D: [99254]

More info for Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB

Timeline for Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB:

Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB first appeared (with stable ids) in SCOP 1.55
Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB appears in SCOPe 2.03
Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB appears in SCOPe 2.05
Protein ssDNA-binding protein from b.40.4.3: Single strand DNA-binding domain, SSB appears in the current release, SCOPe 2.08