SCOPe 2.08: Domain d1fbba_: 1fbb A:

Lineage for d1fbba_ (1fbb A:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.13: Class A G protein-coupled receptor (GPCR)-like [81322] (1 superfamily)
   core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane

4. Superfamily f.13.1: Class A G protein-coupled receptor (GPCR)-like [81321] (5 families)
   Pfam PF13853. Phylogeny described in PubMed 12761335

5. Family f.13.1.1: Bacteriorhodopsin-like [81319] (6 proteins)

6. Protein Bacteriorhodopsin [56871] (3 species)
   a light-driven proton pump

7. Species Halobacterium salinarum [TaxId:2242] [56873] (118 PDB entries)
   Uniprot P02945 17-245

8. Domain d1fbba_: 1fbb A: [43425]
   complexed with ret

Details for d1fbba_

PDB Entry: 1fbb, 3.2 Å

PDB Description: crystal structure of native conformation of bacteriorhodopsin

PDB Compounds: (A:) bacteriorhodopsin

SCOPe Domain Sequences for d1fbba_:

Sequence; same for both SEQRES and ATOM records:

>d1fbba_ f.13.1.1 (A:) Bacteriorhodopsin {Halobacterium salinarum [TaxId: 2242]}
itgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllg
ygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimigtgl
vgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlws
aypvvwligsegagivplnietllfmvldvsakvgfglillrsr

Timeline for d1fbba_:

• d1fbba_ first appeared (with stable ids) in SCOP 1.55
  
• d1fbba_ appears in SCOPe 2.07