SCOPe 2.08: Domain d1e6ya2: 1e6y A:1002-1283

Lineage for d1e6ya2 (1e6y A:1002-1283)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.31: Methyl-coenzyme M reductase subunits [55088] (3 families)
   each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures

5. Family d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain [55094] (3 proteins)
   C-terminal domain is all-alpha

6. Protein Alpha chain [55095] (3 species)

7. Species Methanosarcina barkeri [TaxId:2208] [55098] (1 PDB entry)

8. Domain d1e6ya2: 1e6y A:1002-1283 [39447]
   Other proteins in same PDB: d1e6ya1, d1e6yb1, d1e6yb2, d1e6yc_, d1e6yd1, d1e6ye1, d1e6ye2, d1e6yf_
   complexed with com, f43, gol, tp7

Details for d1e6ya2

PDB Entry: 1e6y, 1.6 Å

PDB Description: methyl-coenzyme m reductase from methanosarcina barkeri

PDB Compounds: (A:) methyl-coenzyme m reductase subunit alpha

SCOPe Domain Sequences for d1e6ya2:

Sequence; same for both SEQRES and ATOM records:

>d1e6ya2 d.58.31.2 (A:1002-1283) Alpha chain {Methanosarcina barkeri [TaxId: 2208]}
aadifskfkkdmevkfaqefgsnkqtggditdktakflrlgpeqdprkvemikagkeiae
krgiafynpmmhsgaplgqraitpytisgtdivcepddlhyvnnaamqqmwddirrtciv
gldmahetlekrlgkevtpetinhylevlnhampgaavvqemmvethpalvddcyvkvft
gddaladeidkqflidinkefseeqaaqikasigktswqaihiptivsrttdgaqtsrwa
amqigmsfisayamcageaavadlsfaakhaalvsmgemlpa

Timeline for d1e6ya2:

• d1e6ya2 first appeared (with stable ids) in SCOP 1.55
  
• d1e6ya2 appears in SCOPe 2.07