SCOPe 2.08: Domain d6d6sa1: 6d6s A:1-131

Lineage for d6d6sa1 (6d6s A:1-131)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.241: Ribosome binding domain-like [100965] (2 superfamilies)
   beta-(2)-alpha(2)-beta(2); 2 layers: beta/alpha; antiparallel beta-sheet: order 1243; topological similarity to the common core of ribosomal proteins L23 and L15e

4. Superfamily d.241.2: Trigger factor ribosome-binding domain [102735] (2 families)
   automatically mapped to Pfam PF05697

5. Family d.241.2.0: automated matches [256436] (1 protein)
   not a true family

6. Protein automated matches [256437] (3 species)
   not a true protein

7. Species Escherichia coli [TaxId:83333] [353445] (1 PDB entry)

8. Domain d6d6sa1: 6d6s A:1-131 [353463]
   Other proteins in same PDB: d6d6sa2, d6d6sa3, d6d6sb2, d6d6sb3
   automated match to d1w26a2

Details for d6d6sa1

PDB Entry: 6d6s

PDB Description: solution structure of trigger factor dimer

PDB Compounds: (A:) Trigger Factor

SCOPe Domain Sequences for d6d6sa1:

Sequence; same for both SEQRES and ATOM records:

>d6d6sa1 d.241.2.0 (A:1-131) automated matches {Escherichia coli [TaxId: 83333]}
mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqryga
svrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgl
eaievekpive

Timeline for d6d6sa1:

• d6d6sa1 first appeared in SCOPe 2.07