Lineage for Species: Vibrio fischeri [TaxId: 312309]

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2423278Fold b.81: Single-stranded left-handed beta-helix [51160] (4 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2423279Superfamily b.81.1: Trimeric LpxA-like enzymes [51161] (9 families) (S)
    superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
  5. 2423626Family b.81.1.0: automated matches [191560] (1 protein)
    not a true family
  6. 2423627Protein automated matches [190967] (35 species)
    not a true protein
  7. 2423865Species Vibrio fischeri [TaxId:312309] [330859] (2 PDB entries)

PDB entries in Species: Vibrio fischeri [TaxId: 312309]:

  1. Domain(s) for 5ux9:
    1. 2423878Domain d5ux9a_: 5ux9 A: [330949]
      automated match to d3eevb_
      complexed with act, cl, fmt, mes, mg
    2. 2423879Domain d5ux9b_: 5ux9 B: [330860]
      automated match to d3eevb_
      complexed with act, cl, fmt, mes, mg
    3. 2423880Domain d5ux9c_: 5ux9 C: [330899]
      automated match to d3eevb_
      complexed with act, cl, fmt, mes, mg
    4. 2423881Domain d5ux9d_: 5ux9 D: [330953]
      automated match to d3eevb_
      complexed with act, cl, fmt, mes, mg
  2. Domain(s) for 6pxa:
    1. 2423866Domain d6pxaa1: 6pxa A:1-217 [374712]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    2. 2423867Domain d6pxab1: 6pxa B:1-217 [374700]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    3. 2423868Domain d6pxac1: 6pxa C:1-218 [374756]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    4. 2423869Domain d6pxad_: 6pxa D: [374755]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    5. 2423870Domain d6pxae1: 6pxa E:1-218 [374732]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    6. 2423871Domain d6pxaf_: 6pxa F: [374740]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    7. 2423872Domain d6pxag1: 6pxa G:1-217 [374770]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    8. 2423873Domain d6pxah_: 6pxa H: [374676]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    9. 2423874Domain d6pxai1: 6pxa I:1-218 [374717]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    10. 2423875Domain d6pxaj1: 6pxa J:1-217 [374688]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    11. 2423876Domain d6pxak1: 6pxa K:1-217 [374744]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch
    12. 2423877Domain d6pxal_: 6pxa L: [374707]
      Other proteins in same PDB: d6pxaa2, d6pxab2, d6pxac2, d6pxae2, d6pxag2, d6pxai2, d6pxaj2, d6pxak2
      automated match to d5ux9d_
      complexed with act, cl, fmt, gol, so4, tch

More info for Species Vibrio fischeri [TaxId:312309] from b.81.1.0 automated matches

Timeline for Species Vibrio fischeri [TaxId:312309] from b.81.1.0 automated matches: