Lineage for d4rovb_ (4rov B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2147804Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2147805Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2148016Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 protein domains)
    strand 5 is parallel to strand 4
    Pfam PF08210; Pfam PF05240
  6. 2148040Protein automated matches [310855] (3 species)
    not a true protein
  7. 2148041Species Human (Homo sapiens) [TaxId:9606] [311219] (16 PDB entries)
  8. 2148046Domain d4rovb_: 4rov B: [309485]
    automated match to d2nytb_
    complexed with zn

Details for d4rovb_

PDB Entry: 4rov (more details), 1.8 Å

PDB Description: the crystal structure of novel apobec3g cd2 head-to-tail dimer suggests the binding mode of full-length apobec3g to hiv-1 ssdna
PDB Compounds: (B:) DNA dC->dU-editing enzyme APOBEC-3G

SCOPe Domain Sequences for d4rovb_:

Sequence, based on SEQRES records: (download)

>d4rovb_ c.97.1.6 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d4rovb_ c.97.1.6 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4rovb_:

Click to download the PDB-style file with coordinates for d4rovb_.
(The format of our PDB-style files is described here.)

Timeline for d4rovb_:

  • d4rovb_ is new in SCOPe 2.06-stable