SCOPe 2.07: Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

Lineage for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families)
   contains extra C-terminal strand 5, order 21345

5. Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins)
   strand 5 is parallel to strand 4
   Pfam PF08210; Pfam PF05240

Proteins:

1. APOBEC2 (APO2) [310756] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [311011] (1 PDB entry)

2. APOBEC3A [310759] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [311014] (2 PDB entries)

3. APOBEC3F [310758] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [311013] (5 PDB entries)

4. APOBEC3G (ARCD) [310757] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [311012] (2 PDB entries)

   2. Species Rhesus monkey (Macaca mulatta) [TaxId:9544] [346337] (2 PDB entries)

5. automated matches [310855] (2 species)
   not a true protein

   1. Species Human (Homo sapiens) [TaxId:9606] [311219] (17 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [311244] (1 PDB entry)

More info for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

Timeline for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains:

• Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains first appeared in SCOPe 2.06