Lineage for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2147804Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2147805Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2148016Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 protein domains)
    strand 5 is parallel to strand 4
    Pfam PF08210; Pfam PF05240

Protein Domains:

  1. 2148017APOBEC2 (APO2) [310756] (1 species)
  2. 2148023APOBEC3A [310759] (1 species)
  3. 2148028APOBEC3F [310758] (1 species)
  4. 2148036APOBEC3G (ARCD) [310757] (1 species)
  5. 2148040automated matches [310855] (3 species)
    not a true protein
    1. 2148041Species Human (Homo sapiens) [TaxId:9606] [311219] (18 PDB entries)
    2. 2148062Species Mouse (Mus musculus) [TaxId:10090] [311244] (1 PDB entry)
    3. 2277803Species Macaca mulatta [TaxId:9544] [321104] (2 PDB entries)

More info for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains

Timeline for Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains:

  • Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains is new in SCOPe 2.06-stable