Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2147804Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2147805Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2148016Family c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 protein domains)
    strand 5 is parallel to strand 4
    Pfam PF08210; Pfam PF05240
  6. 2148040Protein automated matches [310855] (3 species)
    not a true protein
  7. 2148041Species Human (Homo sapiens) [TaxId:9606] [311219] (18 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2kbo:
  2. Domain(s) for 2nbq:
  3. Domain(s) for 3iqs:
  4. Domain(s) for 3ir2:
    1. 2148048Domain d3ir2a_: 3ir2 A: [305584]
      automated match to d4xxoa_
      complexed with cl, mg, zn
    2. 2148049Domain d3ir2b_: 3ir2 B: [305585]
      automated match to d4xxoa_
      complexed with cl, mg, zn
  5. Domain(s) for 3v4j:
    1. 2148051Domain d3v4ja_: 3v4j A: [306675]
      automated match to d4xxoa_
      complexed with pqr, zn
    2. 2148052Domain d3v4jb_: 3v4j B: [306676]
      automated match to d4xxoa_
      complexed with pqr, zn
  6. Domain(s) for 3v4k:
    1. 2148042Domain d3v4ka_: 3v4k A: [306677]
      automated match to d4xxoa_
      complexed with cl, mg, zn
    2. 2148043Domain d3v4kb_: 3v4k B: [306678]
      automated match to d4xxoa_
      complexed with cl, mg, zn
  7. Domain(s) for 3vm8:
    1. 2148059Domain d3vm8a_: 3vm8 A: [306681]
      automated match to d4ioua_
      complexed with zn
    2. 2148060Domain d3vm8b_: 3vm8 B: [306682]
      automated match to d4ioua_
      complexed with zn
  8. Domain(s) for 3vow:
    1. 2148053Domain d3vowa_: 3vow A: [306685]
      automated match to d4ioua_
      complexed with cl, zn
    2. 2148054Domain d3vowb_: 3vow B: [306686]
      automated match to d4ioua_
      complexed with cl, zn
  9. Domain(s) for 3wus:
    1. 2298640Domain d3wusb_: 3wus B: [341941]
      automated match to d2kema_
      complexed with zn
    2. 2298643Domain d3wusa_: 3wus A: [341944]
      automated match to d2kema_
      complexed with zn
  10. Domain(s) for 4rov:
    1. 2148045Domain d4rova_: 4rov A: [309484]
      automated match to d2nytb_
      complexed with zn
    2. 2148046Domain d4rovb_: 4rov B: [309485]
      automated match to d2nytb_
      complexed with zn
  11. Domain(s) for 4row:
  12. Domain(s) for 5cqd:
    1. 2148057Domain d5cqda_: 5cqd A: [310347]
      Other proteins in same PDB: d5cqdc2
      automated match to d4xxoa_
      complexed with gol, zn
    2. 2148058Domain d5cqdc1: 5cqd C:188-378 [310348]
      Other proteins in same PDB: d5cqdc2
      automated match to d4xxoa_
      complexed with gol, zn
  13. Domain(s) for 5cqh:
  14. Domain(s) for 5cqi:
  15. Domain(s) for 5cqk:
  16. Domain(s) for 5hx4:
    1. 2274208Domain d5hx4a_: 5hx4 A: [317509]
      automated match to d2kema_
    2. 2274211Domain d5hx4b_: 5hx4 B: [317512]
      automated match to d2kema_
  17. Domain(s) for 5hx5:
    1. 2274205Domain d5hx5a_: 5hx5 A: [317506]
      automated match to d2kema_
      complexed with zn
    2. 2274305Domain d5hx5b_: 5hx5 B: [317606]
      automated match to d2kema_
      complexed with zn
  18. Domain(s) for 5tkm:
    1. 2292129Domain d5tkma_: 5tkm A: [335430]
      automated match to d3vm8a_
      complexed with zn
    2. 2292265Domain d5tkmb_: 5tkm B: [335566]
      automated match to d3vm8a_
      complexed with zn

More info for Species Human (Homo sapiens) [TaxId:9606] from c.97.1.6 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from c.97.1.6 automated matches:

  • Species Human (Homo sapiens) [TaxId:9606] from c.97.1.6 automated matches is new in SCOPe 2.06-stable