SCOPe 2.08: Domain d1ypda2: 1ypd A:182-360

Lineage for d1ypda2 (1ypd A:182-360)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like

4. Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (7 families)
   binds cofactor molecules in the opposite direction than classical Rossmann fold

5. Family c.31.1.0: automated matches [191352] (1 protein)
   not a true family

6. Protein automated matches [190312] (14 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255616] (4 PDB entries)

8. Domain d1ypda2: 1ypd A:182-360 [303405]
   Other proteins in same PDB: d1ypda1, d1ypda3, d1ypdb1, d1ypdb3
   automated match to d2vk1a2
   complexed with mg, tpp

Details for d1ypda2

PDB Entry: 1ypd, 2.4 Å

PDB Description: thdp dependent pyruvate decarboyxlase from yeast (form b)

PDB Compounds: (A:) pyruvate decarboxylase (form b)

SCOPe Domain Sequences for d1ypda2:

Sequence; same for both SEQRES and ATOM records:

>d1ypda2 c.31.1.0 (A:182-360) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
qtpidmslkpndaesekevidtilalvkdaknpviladaccsrhdvkaetkklidltqfp
avvtpmgkgsideqhpryggvyvgtlskpevkeavesadlilsvgallsdfntgsfsysy
ktknivefhsdhmkirnatfpgvqmkfvlqkllttiadaakgykpvavpartpanaavp

Timeline for d1ypda2:

• d1ypda2 first appeared in SCOPe 2.06
  
• d1ypda2 appears in SCOPe 2.07