![]() | Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
![]() | Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily) 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465 |
![]() | Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) ![]() there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules |
![]() | Family c.36.1.0: automated matches [227300] (1 protein) not a true family |
![]() | Protein automated matches [227126] (21 species) not a true protein |
![]() | Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [255615] (5 PDB entries) |
![]() | Domain d1ypda1: 1ypd A:2-181 [303404] Other proteins in same PDB: d1ypda2, d1ypdb2 automated match to d2vk1a1 complexed with mg, tpp |
PDB Entry: 1ypd (more details), 2.4 Å
SCOPe Domain Sequences for d1ypda1:
Sequence, based on SEQRES records: (download)
>d1ypda1 c.36.1.0 (A:2-181) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} seitlgkylferlkqvnvntvfglpgdfnlslldkiyevegmrwagnanelnaayaadgy arikgmsciittfgvgelsalngiagsyaehvgvlhvvgvpsisaqakqlllhhtlgngd ftvfhrmsanisettamitdiatapaeidrcirttyvtqrpvylglpanlvdlnvpakll
>d1ypda1 c.36.1.0 (A:2-181) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} seitlgkylferlkqvnvntvfglpgdfnlslldkiyevegmrwagnanelnaayaadgy arikgmsciittfgvgelsalngiagsyaehvgvlhvvgvpshhtlgngdftvfhrmsan isettamitdiatapaeidrcirttyvtqrpvylglpanlvdlnvpakll
Timeline for d1ypda1: