SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)
Family c.67.1.9: SepSecS-like [159704] (2 proteins)
Pfam PF05889
Protein automated matches [254680] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [255862] (4 PDB entries)
1. Domains for 3hl2:
  1. Domain d3hl2a_: 3hl2 A: [246500]
    automated match to d3bc8a1
    protein/RNA complex; complexed with plr, sep, ts6
  2. Domain d3hl2b_: 3hl2 B: [246501]
    automated match to d3bc8a1
    protein/RNA complex; complexed with plr, sep, ts6
  3. Domain d3hl2c_: 3hl2 C: [246502]
    automated match to d3bc8a1
    protein/RNA complex; complexed with plr, sep, ts6
  4. Domain d3hl2d_: 3hl2 D: [246503]
    automated match to d3bc8a1
    protein/RNA complex; complexed with plr, sep, ts6
2. Domains for 4zdl:
  1. Domain d4zdla_: 4zdl A: [316204]
    automated match to d3hl2c_
    complexed with flc, plr; mutant
  2. Domain d4zdlb_: 4zdl B: [316148]
    automated match to d3hl2c_
    complexed with flc, plr; mutant
3. Domains for 4zdo:
  1. Domain d4zdoa_: 4zdo A: [316159]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant
  2. Domain d4zdoc_: 4zdo C: [316189]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant
4. Domains for 4zdp:
  1. Domain d4zdpa_: 4zdp A: [316201]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant
  2. Domain d4zdpb_: 4zdp B: [316203]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant
  3. Domain d4zdpc_: 4zdp C: [316151]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant
  4. Domain d4zdpd_: 4zdp D: [316173]
    automated match to d3hl2c_
    protein/RNA complex; complexed with plr, po4; mutant

More info for Protein automated matches from c.67.1.9: SepSecS-like

Timeline for Protein automated matches from c.67.1.9: SepSecS-like:

Protein automated matches from c.67.1.9: SepSecS-like first appeared in SCOPe 2.04
Protein automated matches from c.67.1.9: SepSecS-like appears in SCOPe 2.07