SCOPe 2.08: Domain d4n5yn1: 4n5y N:1-174

Lineage for d4n5yn1 (4n5y N:1-174)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families)

5. Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 proteins)

6. Protein Influenza hemagglutinin (stalk) [58066] (22 species)
   trimer

7. Species Influenza A virus, different strains [TaxId:11320] [58067] (150 PDB entries)

8. Domain d4n5yn1: 4n5y N:1-174 [253894]
   Other proteins in same PDB: d4n5ya1, d4n5ya2, d4n5yb2, d4n5yc1, d4n5yc2, d4n5yd2, d4n5ye1, d4n5ye2, d4n5yf2, d4n5yg1, d4n5yg2, d4n5yh2, d4n5yi1, d4n5yi2, d4n5yj2, d4n5yk1, d4n5yk2, d4n5yl2, d4n5ym1, d4n5ym2, d4n5yn2, d4n5yo1, d4n5yo2, d4n5yp2, d4n5yq1, d4n5yq2, d4n5yr2, d4n5ys1, d4n5ys2, d4n5yt2, d4n5yu1, d4n5yu2, d4n5yv2, d4n5yw1, d4n5yw2, d4n5yx2, d4n5yy1, d4n5yy2, d4n5yz2
   automated match to d4n5zb_
   complexed with nag; mutant

Details for d4n5yn1

PDB Entry: 4n5y, 3.16 Å

PDB Description: crystal structure of h5 hemagglutinin mutant (n158d, n224k and q226l) from the influenza virus a/viet nam/1203/2004 (h5n1)

PDB Compounds: (N:) Hemagglutinin HA2 chain

SCOPe Domain Sequences for d4n5yn1:

Sequence; same for both SEQRES and ATOM records:

>d4n5yn1 h.3.1.1 (N:1-174) Influenza hemagglutinin (stalk) {Influenza A virus, different strains [TaxId: 11320]}
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesvrngtydypqyseearlkreeis

Timeline for d4n5yn1:

• d4n5yn1 first appeared in SCOPe 2.04, called d4n5yn_
  
• d4n5yn1 appears in SCOPe 2.07