Lineage for d4n5yb1 (4n5y B:1-174)

  1. Root: SCOPe 2.08
  2. 3039230Class h: Coiled coil proteins [57942] (7 folds)
  3. 3040824Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 3040825Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families) (S)
  5. 3040826Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 proteins)
  6. 3040827Protein Influenza hemagglutinin (stalk) [58066] (22 species)
    trimer
  7. 3041028Species Influenza A virus, different strains [TaxId:11320] [58067] (150 PDB entries)
  8. 3041408Domain d4n5yb1: 4n5y B:1-174 [253882]
    Other proteins in same PDB: d4n5ya1, d4n5ya2, d4n5yb2, d4n5yc1, d4n5yc2, d4n5yd2, d4n5ye1, d4n5ye2, d4n5yf2, d4n5yg1, d4n5yg2, d4n5yh2, d4n5yi1, d4n5yi2, d4n5yj2, d4n5yk1, d4n5yk2, d4n5yl2, d4n5ym1, d4n5ym2, d4n5yn2, d4n5yo1, d4n5yo2, d4n5yp2, d4n5yq1, d4n5yq2, d4n5yr2, d4n5ys1, d4n5ys2, d4n5yt2, d4n5yu1, d4n5yu2, d4n5yv2, d4n5yw1, d4n5yw2, d4n5yx2, d4n5yy1, d4n5yy2, d4n5yz2
    automated match to d4n5zb_
    complexed with nag; mutant

Details for d4n5yb1

PDB Entry: 4n5y (more details), 3.16 Å

PDB Description: crystal structure of h5 hemagglutinin mutant (n158d, n224k and q226l) from the influenza virus a/viet nam/1203/2004 (h5n1)
PDB Compounds: (B:) Hemagglutinin HA2 chain

SCOPe Domain Sequences for d4n5yb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4n5yb1 h.3.1.1 (B:1-174) Influenza hemagglutinin (stalk) {Influenza A virus, different strains [TaxId: 11320]}
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesvrngtydypqyseearlkreeis

SCOPe Domain Coordinates for d4n5yb1:

Click to download the PDB-style file with coordinates for d4n5yb1.
(The format of our PDB-style files is described here.)

Timeline for d4n5yb1:

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Domains from same chain:
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d4n5yb2
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Domains from other chains:
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d4n5ya1, d4n5ya2, d4n5yc1, d4n5yc2, d4n5yd1, d4n5yd2, d4n5ye1, d4n5ye2, d4n5yf1, d4n5yf2, d4n5yg1, d4n5yg2, d4n5yh1, d4n5yh2, d4n5yi1, d4n5yi2, d4n5yj1, d4n5yj2, d4n5yk1, d4n5yk2, d4n5yl1, d4n5yl2, d4n5ym1, d4n5ym2, d4n5yn1, d4n5yn2, d4n5yo1, d4n5yo2, d4n5yp1, d4n5yp2, d4n5yq1, d4n5yq2, d4n5yr1, d4n5yr2, d4n5ys1, d4n5ys2, d4n5yt1, d4n5yt2, d4n5yu1, d4n5yu2, d4n5yv1, d4n5yv2, d4n5yw1, d4n5yw2, d4n5yx1, d4n5yx2, d4n5yy1, d4n5yy2, d4n5yz1, d4n5yz2