SCOPe 2.08: Domain d3vdra_: 3vdr A:

Lineage for d3vdra_ (3vdr A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
   has additional subdomain(s) that are not in the common domain
   

6. Protein automated matches [190085] (59 species)
   not a true protein

7. Species Alcaligenes faecalis [TaxId:511] [188427] (11 PDB entries)

8. Domain d3vdra_: 3vdr A: [250518]
   automated match to d3w8ea_
   complexed with 3hr, aae, ca, cl, nad, nai

Details for d3vdra_

PDB Entry: 3vdr, 3 Å

PDB Description: Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)

PDB Compounds: (A:) D-3-hydroxybutyrate dehydrogenase

SCOPe Domain Sequences for d3vdra_:

Sequence; same for both SEQRES and ATOM records:

>d3vdra_ c.2.1.2 (A:) automated matches {Alcaligenes faecalis [TaxId: 511]}
mlkgkkavvtgstsgiglamatelakagadvvingfgqpediererstleskfgvkayyl
nadlsdaqatrdfiakaaealggldilvnnagiqhtapieefpvdkwnaiialnlsavfh
gtaaalpimqkqgwgriiniasahglvasvnksayvaakhgvvgltkvtalenagkgitc
naicpgwvrtplvekqieaisqqkgidieaaarellaekqpslqfvtpeqlggaavflss
aaadqmtgttlsldggwtar

Timeline for d3vdra_:

• d3vdra_ first appeared in SCOPe 2.04
  
• d3vdra_ appears in SCOPe 2.07