SCOPe 2.05: Domain d3ts7b_: 3ts7 B:

Lineage for d3ts7b_ (3ts7 B:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (30 species)
   not a true protein

7. Species Methylococcus capsulatus [TaxId:414] [256105] (1 PDB entry)

8. Domain d3ts7b_: 3ts7 B: [249997]
   automated match to d4f62a_
   complexed with po4

Details for d3ts7b_

PDB Entry: 3ts7, 1.94 Å

PDB Description: crystal structure of farnesyl diphosphate synthase (target efi-501951) from methylococcus capsulatus

PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d3ts7b_:

Sequence, based on SEQRES records:

>d3ts7b_ a.128.1.0 (B:) automated matches {Methylococcus capsulatus [TaxId: 414]}
nperslsdfmrssqerveraldarlpaadrmperlhqamrysvlgggkrmrplltyatgq
tigvaadlldgpacavefihvyslihddlpamddddlrrgkptchkaydeatailagdgl
qalafhvlaqdpsiavpaenriamietlakasgpagmvggqaidlasvgkkldlpglenm
hirktgalirasvrlaclarpglpaeqfdrldhyakciglafqiqddildeesdtqtlgk
trgkdrdhnkpnypallglsgakekaeemheaaleslagfgpeadllrelarfiiqrqsa
enlyfqsh

Sequence, based on observed residues (ATOM records):

>d3ts7b_ a.128.1.0 (B:) automated matches {Methylococcus capsulatus [TaxId: 414]}
nperslsdfmrssqerveraldarlpaadrmperlhqamrysvlgggkrmrplltyatgq
tigvaadlldgpacavefihvyslihddlpamddddlrrgkptchkaydeatailagdgl
qalafhvlaqdpsiavpaenriamietlakasgpagmvggqaidlasvgkkldlpglenm
hirktgalirasvrlaclarpglpaeqfdrldhyakciglafqiqddildeesdtqtlkp
nypallglsgakekaeemheaaleslagfgpeadllrelarfiiqrqsaenlyfqsh

Timeline for d3ts7b_:

• d3ts7b_ first appeared in SCOPe 2.04
  
• d3ts7b_ is called d3ts7b1 in SCOPe 2.06
  
• d3ts7b_ appears in the current release, SCOPe 2.08, called d3ts7b1