Lineage for d3ts7b1 (3ts7 B:2-300)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2010547Fold a.128: Terpenoid synthases [48575] (1 superfamily)
    multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
  4. 2010548Superfamily a.128.1: Terpenoid synthases [48576] (6 families) (S)
    duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J
  5. 2010904Family a.128.1.0: automated matches [196408] (1 protein)
    not a true family
  6. 2010905Protein automated matches [196409] (36 species)
    not a true protein
  7. 2010969Species Methylococcus capsulatus [TaxId:414] [256105] (1 PDB entry)
  8. 2010971Domain d3ts7b1: 3ts7 B:2-300 [249997]
    Other proteins in same PDB: d3ts7a2, d3ts7b2
    automated match to d4f62a_
    complexed with po4

Details for d3ts7b1

PDB Entry: 3ts7 (more details), 1.94 Å

PDB Description: crystal structure of farnesyl diphosphate synthase (target efi-501951) from methylococcus capsulatus
PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d3ts7b1:

Sequence, based on SEQRES records: (download)

>d3ts7b1 a.128.1.0 (B:2-300) automated matches {Methylococcus capsulatus [TaxId: 414]}
nperslsdfmrssqerveraldarlpaadrmperlhqamrysvlgggkrmrplltyatgq
tigvaadlldgpacavefihvyslihddlpamddddlrrgkptchkaydeatailagdgl
qalafhvlaqdpsiavpaenriamietlakasgpagmvggqaidlasvgkkldlpglenm
hirktgalirasvrlaclarpglpaeqfdrldhyakciglafqiqddildeesdtqtlgk
trgkdrdhnkpnypallglsgakekaeemheaaleslagfgpeadllrelarfiiqrqs

Sequence, based on observed residues (ATOM records): (download)

>d3ts7b1 a.128.1.0 (B:2-300) automated matches {Methylococcus capsulatus [TaxId: 414]}
nperslsdfmrssqerveraldarlpaadrmperlhqamrysvlgggkrmrplltyatgq
tigvaadlldgpacavefihvyslihddlpamddddlrrgkptchkaydeatailagdgl
qalafhvlaqdpsiavpaenriamietlakasgpagmvggqaidlasvgkkldlpglenm
hirktgalirasvrlaclarpglpaeqfdrldhyakciglafqiqddildeesdtqtlkp
nypallglsgakekaeemheaaleslagfgpeadllrelarfiiqrqs

SCOPe Domain Coordinates for d3ts7b1:

Click to download the PDB-style file with coordinates for d3ts7b1.
(The format of our PDB-style files is described here.)

Timeline for d3ts7b1:

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Domains from same chain:
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d3ts7b2