SCOPe 2.04: Domain d2ct8b1: 2ct8 B:1-346

Lineage for d2ct8b1 (2ct8 B:1-346)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family

6. Protein automated matches [190459] (36 species)
   not a true protein

7. Species Aquifex aeolicus [TaxId:63363] [230619] (2 PDB entries)

8. Domain d2ct8b1: 2ct8 B:1-346 [241486]
   Other proteins in same PDB: d2ct8a2, d2ct8b2
   automated match to d2csxa1
   protein/RNA complex; complexed with msp

Details for d2ct8b1

PDB Entry: 2ct8, 2.7 Å

PDB Description: Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met) and methionyl-adenylate anologue

PDB Compounds: (B:) Methionyl-tRNA synthetase

SCOPe Domain Sequences for d2ct8b1:

Sequence, based on SEQRES records:

>d2ct8b1 c.26.1.0 (B:1-346) automated matches {Aquifex aeolicus [TaxId: 63363]}
mtlmkkfyvttpiyyvndvphlghayttiaadtiaryyrlrdydvffltgtdehglkiqk
kaeelgispkelvdrnaerfkklweflkieytkfirttdpyhvkfvqkvfeecykrgdiy
lgeyegwycvgceefkseaelaedhtcpihqkkceyikepsyffrlskyqdkllelyekn
pefiqpdyrrneiisfvkqglkdlsvtrprsrvkwgipvpfdpehtiyvwfdalfnyisa
ledkveiywpadlhlvgkdilrfhtvywpaflmslgyelpkkvfahgwwtvegkkmsktl
gnvvdpyevvqeygldevryfllrevpfgqdgdfskkailnringe

Sequence, based on observed residues (ATOM records):

>d2ct8b1 c.26.1.0 (B:1-346) automated matches {Aquifex aeolicus [TaxId: 63363]}
mtlmkkfyvttpiyyvndvphlghayttiaadtiaryyrlrdydvffltgtdehglkiqk
kaeelgispkelvdrnaerfkklweflkieytkfirttdpyhvkfvqkvfeecykrgdiy
lgeyekepsyffrlskyqdkllelyeknpefiqpdyrrneiisfvkqglkdlsvtrprsr
vkwgipvpfdpehtiyvwfdalfnyisaledkveiywpadlhlvgkdilrfhtvywpafl
mslgyelpkkvfahgwwtvegkkmsktlgnvvdpyevvqeygldevryfllrevpfgqdg
dfskkailnringe

Timeline for d2ct8b1:

• d2ct8b1 is new in SCOPe 2.04-stable
  
• d2ct8b1 appears in SCOPe 2.05
  
• d2ct8b1 appears in the current release, SCOPe 2.08