SCOPe 2.06: Domain d4j0od_: 4j0o D:

Lineage for d4j0od_ (4j0o D:)

1. Root: SCOPe 2.06

2. Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)

3. Fold f.6: Leukocidin-like [56958] (1 superfamily)
   subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel

4. Superfamily f.6.1: Leukocidin-like [56959] (3 families)

5. Family f.6.1.0: automated matches [227293] (1 protein)
   not a true family

6. Protein automated matches [227114] (5 species)
   not a true protein

7. Species Staphylococcus phage [TaxId:71366] [236419] (5 PDB entries)

8. Domain d4j0od_: 4j0o D: [237593]
   automated match to d4j0oa_
   mutant

Details for d4j0od_

PDB Entry: 4j0o, 2.5 Å

PDB Description: structure of the y246a mutant of the panton-valentine leucocidin s component from staphylococcus aureus

PDB Compounds: (D:) LukS-PV

SCOPe Domain Sequences for d4j0od_:

Sequence, based on SEQRES records:

>d4j0od_ f.6.1.0 (D:) automated matches {Staphylococcus phage [TaxId: 71366]}
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsgps
tggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvgyk
pysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrr
tthagnsylegsrihnafvnrnytvkyevnwktheikvkghn

Sequence, based on observed residues (ATOM records):

>d4j0od_ f.6.1.0 (D:) automated matches {Staphylococcus phage [TaxId: 71366]}
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsgfn
ysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvgykpysqnprd
yfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrtagnsyle
gsrihnafvnrnytvkyevnwktheikvkghn

Timeline for d4j0od_:

• d4j0od_ first appeared in SCOPe 2.03
  
• d4j0od_ appears in SCOPe 2.05
  
• d4j0od_ appears in SCOPe 2.07
  
• d4j0od_ appears in the current release, SCOPe 2.08