SCOPe 2.07: Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]

Lineage for Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
core: 5 helices; bundle
Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families)
Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)
Protein automated matches [190369] (8 species)
not a true protein
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [232370] (2 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]:

Domain(s) for 3h47:
- Domain d3h47a1: 3h47 A:1-147 [232371]
  Other proteins in same PDB: d3h47a2
  automated match to d1e6jp2
Domain(s) for 3h4e:
1. Domain d3h4ea1: 3h4e A:1-147 [232376]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
2. Domain d3h4eb1: 3h4e B:1-147 [232374]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
3. Domain d3h4ec1: 3h4e C:1-147 [232375]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
4. Domain d3h4ed1: 3h4e D:1-147 [232377]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
5. Domain d3h4ee1: 3h4e E:1-147 [232378]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
6. Domain d3h4ef1: 3h4e F:1-147 [232380]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
7. Domain d3h4eg1: 3h4e G:1-147 [232379]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
8. Domain d3h4eh1: 3h4e H:1-147 [232381]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
9. Domain d3h4ei1: 3h4e I:1-147 [232382]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
10. Domain d3h4ej1: 3h4e J:1-147 [232383]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d1e6jp2
11. Domain d3h4ek1: 3h4e K:1-147 [239333]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d3h47a1
12. Domain d3h4el1: 3h4e L:1-147 [239335]
  Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
  automated match to d3h47a1

More info for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches

Timeline for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches:

Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches first appeared in SCOPe 2.03
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches appears in SCOPe 2.06
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches appears in the current release, SCOPe 2.08