Lineage for Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2000631Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 2000632Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families) (S)
  5. 2000633Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 protein domains)
  6. 2000764Protein automated matches [190369] (6 species)
    not a true protein
  7. 2000780Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [232370] (2 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]:

  1. Domain(s) for 3h47:
  2. Domain(s) for 3h4e:
    1. 2000782Domain d3h4ea1: 3h4e A:1-147 [232376]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    2. 2000783Domain d3h4eb1: 3h4e B:1-147 [232374]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    3. 2000784Domain d3h4ec1: 3h4e C:1-147 [232375]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    4. 2000785Domain d3h4ed1: 3h4e D:1-147 [232377]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    5. 2000786Domain d3h4ee1: 3h4e E:1-147 [232378]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    6. 2000787Domain d3h4ef1: 3h4e F:1-147 [232380]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    7. 2000788Domain d3h4eg1: 3h4e G:1-147 [232379]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    8. 2000789Domain d3h4eh1: 3h4e H:1-147 [232381]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    9. 2000790Domain d3h4ei1: 3h4e I:1-147 [232382]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    10. 2000791Domain d3h4ej1: 3h4e J:1-147 [232383]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d1e6jp2
    11. 2000792Domain d3h4ek1: 3h4e K:1-147 [239333]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d3h47a1
    12. 2000793Domain d3h4el1: 3h4e L:1-147 [239335]
      Other proteins in same PDB: d3h4ea2, d3h4eb2, d3h4ec2, d3h4ed2, d3h4ee2, d3h4ef2, d3h4eg2, d3h4eh2, d3h4ei2, d3h4ej2, d3h4ek2, d3h4el2
      automated match to d3h47a1

More info for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches

Timeline for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from a.73.1.1 automated matches: