Lineage for Species: Rhizobium etli [TaxId: 347834]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137472Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2137707Family c.72.1.0: automated matches [191321] (1 protein)
    not a true family
  6. 2137708Protein automated matches [190117] (40 species)
    not a true protein
  7. 2137846Species Rhizobium etli [TaxId:347834] [226336] (19 PDB entries)

PDB entries in Species: Rhizobium etli [TaxId: 347834]:

  1. Domain(s) for 4e3a:
    1. 2137869Domain d4e3aa_: 4e3a A: [220230]
      automated match to d1lioa_
      complexed with adn
    2. 2137870Domain d4e3ab_: 4e3a B: [220231]
      automated match to d1lioa_
      complexed with adn
  2. Domain(s) for 4jks:
    1. 2137849Domain d4jksa_: 4jks A: [223878]
      automated match to d1lioa_
      complexed with adn, dms
    2. 2137850Domain d4jksb_: 4jks B: [223879]
      automated match to d1lioa_
      complexed with adn, dms
  3. Domain(s) for 4jku:
    1. 2137853Domain d4jkua_: 4jku A: [223880]
      automated match to d1lioa_
      complexed with adn, dms, qnc
    2. 2137854Domain d4jkub_: 4jku B: [223881]
      automated match to d1lioa_
      complexed with adn, dms, qnc
  4. Domain(s) for 4k8c:
    1. 2137867Domain d4k8ca_: 4k8c A: [224203]
      automated match to d1lioa_
      complexed with adn, adp, dms, k
    2. 2137868Domain d4k8cb_: 4k8c B: [224204]
      automated match to d1lioa_
      complexed with adn, adp, dms, k
  5. Domain(s) for 4k8k:
    1. 2137859Domain d4k8ka1: 4k8k A:-1-328 [224205]
      Other proteins in same PDB: d4k8ka2
      automated match to d1lioa_
      complexed with 1pj, 1pk, adn, k
    2. 2137860Domain d4k8kb_: 4k8k B: [224206]
      Other proteins in same PDB: d4k8ka2
      automated match to d1lioa_
      complexed with 1pj, 1pk, adn, k
  6. Domain(s) for 4k8p:
    1. 2137861Domain d4k8pa1: 4k8p A:-1-328 [224207]
      Other proteins in same PDB: d4k8pa2, d4k8pb2
      automated match to d1lioa_
      complexed with 12m, adn, dms, k
    2. 2137862Domain d4k8pb1: 4k8p B:-1-328 [224208]
      Other proteins in same PDB: d4k8pa2, d4k8pb2
      automated match to d1lioa_
      complexed with 12m, adn, dms, k
  7. Domain(s) for 4k8t:
    1. 2137883Domain d4k8ta_: 4k8t A: [224212]
      automated match to d1lioa_
      complexed with adn, dms, e34, k
    2. 2137884Domain d4k8tb_: 4k8t B: [224213]
      automated match to d1lioa_
      complexed with adn, dms, e34, k
  8. Domain(s) for 4k93:
    1. 2137863Domain d4k93a_: 4k93 A: [224216]
      automated match to d1lioa_
      complexed with 1q8, adn, dms, k
    2. 2137864Domain d4k93b_: 4k93 B: [224217]
      automated match to d1lioa_
      complexed with 1q8, adn, dms, k
  9. Domain(s) for 4k9c:
    1. 2137857Domain d4k9ca_: 4k9c A: [224218]
      automated match to d1lioa_
      complexed with 1q8, adn, c29, dms, k
    2. 2137858Domain d4k9cb_: 4k9c B: [224219]
      automated match to d1lioa_
      complexed with 1q8, adn, c29, dms, k
  10. Domain(s) for 4k9i:
    1. 2137879Domain d4k9ia_: 4k9i A: [224223]
      automated match to d1lioa_
      complexed with adn, dms, k, nrh
    2. 2137880Domain d4k9ib_: 4k9i B: [224224]
      automated match to d1lioa_
      complexed with adn, dms, k, nrh
  11. Domain(s) for 4kad:
    1. 2137871Domain d4kada_: 4kad A: [224235]
      automated match to d1lioa_
      complexed with 1qb, adn, dms, k
    2. 2137872Domain d4kadb_: 4kad B: [224236]
      automated match to d1lioa_
      complexed with 1qb, adn, dms, k
  12. Domain(s) for 4kah:
    1. 2137877Domain d4kaha_: 4kah A: [224241]
      automated match to d1lioa_
      complexed with adn, br, byz, dms, k
    2. 2137878Domain d4kahb_: 4kah B: [224242]
      automated match to d1lioa_
      complexed with adn, br, byz, dms, k
  13. Domain(s) for 4kal:
    1. 2137847Domain d4kala_: 4kal A: [224243]
      automated match to d1lioa_
      complexed with adn, dms, k, q3c
    2. 2137848Domain d4kalb_: 4kal B: [224244]
      automated match to d1lioa_
      complexed with adn, dms, k, q3c
  14. Domain(s) for 4kan:
    1. 2137855Domain d4kana_: 4kan A: [224245]
      automated match to d1lioa_
      complexed with adn, dzy, k
    2. 2137856Domain d4kanb_: 4kan B: [224246]
      automated match to d1lioa_
      complexed with adn, dzy, k
  15. Domain(s) for 4kbe:
    1. 2137881Domain d4kbea_: 4kbe A: [224250]
      automated match to d1lioa_
      complexed with adn, bze, dms, k
    2. 2137882Domain d4kbeb_: 4kbe B: [224251]
      automated match to d1lioa_
      complexed with adn, bze, dms, k
  16. Domain(s) for 4lbg:
    1. 2137851Domain d4lbga1: 4lbg A:-1-328 [224634]
      Other proteins in same PDB: d4lbga2
      automated match to d1lioa_
      complexed with adn, dms, k
    2. 2137852Domain d4lbgb_: 4lbg B: [224635]
      Other proteins in same PDB: d4lbga2
      automated match to d1lioa_
      complexed with adn, dms, k
  17. Domain(s) for 4lbx:
    1. 2137873Domain d4lbxa1: 4lbx A:-1-328 [224642]
      Other proteins in same PDB: d4lbxa2
      automated match to d1lioa_
      complexed with adn, ctn, dms, k
    2. 2137874Domain d4lbxb_: 4lbx B: [224643]
      Other proteins in same PDB: d4lbxa2
      automated match to d1lioa_
      complexed with adn, ctn, dms, k
  18. Domain(s) for 4lc4:
    1. 2137875Domain d4lc4a_: 4lc4 A: [224646]
      automated match to d1lioa_
      complexed with adn, dms, gmp, k
    2. 2137876Domain d4lc4b_: 4lc4 B: [224647]
      automated match to d1lioa_
      complexed with adn, dms, gmp, k
  19. Domain(s) for 4lca:
    1. 2137865Domain d4lcaa_: 4lca A: [224652]
      automated match to d1lioa_
      complexed with adn, dms, k, thm
    2. 2137866Domain d4lcab_: 4lca B: [224653]
      automated match to d1lioa_
      complexed with adn, dms, k, thm

More info for Species Rhizobium etli [TaxId:347834] from c.72.1.0 automated matches

Timeline for Species Rhizobium etli [TaxId:347834] from c.72.1.0 automated matches: