SCOPe 2.08: Family c.72.1.0: automated matches

Lineage for Family c.72.1.0: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.72: Ribokinase-like [53612] (3 superfamilies)
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
potential superfamily: members of this fold have similar functions but different ATP-binding sites

Superfamily c.72.1: Ribokinase-like [53613] (6 families)
has extra strand located between strands 2 and 3
Family c.72.1.0: automated matches [191321] (1 protein)
not a true family

Protein:

automated matches [190117] (50 species)
not a true protein
1. Species African malaria mosquito (Anopheles gambiae) [TaxId:7165] [196378] (1 PDB entry)
2. Species Agrobacterium tumefaciens [TaxId:176299] [225189] (2 PDB entries)
3. Species Bacillus halodurans [TaxId:272558] [194493] (1 PDB entry)
4. Species Bacteroides thetaiotaomicron [TaxId:226186] [225292] (1 PDB entry)
5. Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [226519] (5 PDB entries)
6. Species Burkholderia multivorans [TaxId:395019] [326309] (1 PDB entry)
7. Species Burkholderia thailandensis [TaxId:271848] [196112] (5 PDB entries)
8. Species Chlorobaculum tepidum [TaxId:1097] [232683] (1 PDB entry)
9. Species Clostridium perfringens [TaxId:1502] [255915] (1 PDB entry)
10. Species Corynebacterium glutamicum [TaxId:1718] [189540] (1 PDB entry)
11. Species Cryptococcus neoformans [TaxId:235443] [351144] (2 PDB entries)
12. Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [268849] (3 PDB entries)
13. Species Enterococcus faecalis [TaxId:1351] [186955] (2 PDB entries)
14. Species Enterococcus faecalis [TaxId:226185] [187075] (3 PDB entries)
15. Species Escherichia coli K-12 [TaxId:83333] [189558] (5 PDB entries)
16. Species Escherichia coli [TaxId:217992] [189024] (2 PDB entries)
17. Species Escherichia coli [TaxId:562] [188596] (5 PDB entries)
18. Species Escherichia coli [TaxId:83333] [402932] (3 PDB entries)
19. Species Klebsiella pneumoniae [TaxId:272620] [225726] (2 PDB entries)
20. Species Klebsiella pneumoniae [TaxId:573] [370486] (2 PDB entries)
21. Species Leishmania donovani [TaxId:5661] [382657] (1 PDB entry)
22. Species Leishmania donovani [TaxId:981087] [369227] (7 PDB entries)
23. Species Listeria innocua [TaxId:1642] [196383] (4 PDB entries)
24. Species Methanocaldococcus jannaschii [TaxId:243232] [347364] (1 PDB entry)
25. Species Methanococcus jannaschii [TaxId:2190] [187510] (2 PDB entries)
26. Species Methanosarcinales archaeon [TaxId:2250255] [401068] (1 PDB entry)
27. Species Mycobacterium bovis [TaxId:233413] [260078] (1 PDB entry)
28. Species Mycobacterium tuberculosis [TaxId:1773] [193352] (12 PDB entries)
29. Species Mycobacterium tuberculosis [TaxId:83332] [368292] (1 PDB entry)
30. Species Polaromonas sp. [TaxId:296591] [226331] (1 PDB entry)
31. Species Pseudomonas aeruginosa [TaxId:208964] [320939] (1 PDB entry)
32. Species Pyrococcus horikoshii OT3 [TaxId:70601] [225622] (1 PDB entry)
33. Species Pyrococcus horikoshii [TaxId:53953] [225557] (2 PDB entries)
34. Species Rhizobium etli [TaxId:347834] [226336] (19 PDB entries)
35. Species Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [226248] (1 PDB entry)
36. Species Staphylococcus aureus [TaxId:1280] [187913] (4 PDB entries)
37. Species Staphylococcus aureus [TaxId:158878] [237768] (4 PDB entries)
38. Species Staphylococcus aureus [TaxId:282458] [312718] (3 PDB entries)
39. Species Staphylococcus aureus [TaxId:93061] [225257] (2 PDB entries)
40. Species Staphylococcus aureus [TaxId:93062] [195529] (1 PDB entry)
41. Species Sulfolobus tokodaii [TaxId:273063] [186841] (2 PDB entries)
42. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [365917] (3 PDB entries)
43. Species Thermococcus litoralis [TaxId:2265] [226717] (2 PDB entries)
44. Species Thermus sp. [TaxId:1577051] [389576] (1 PDB entry)
45. Species Trypanosoma brucei [TaxId:185431] [195074] (1 PDB entry)
46. Species Trypanosoma brucei [TaxId:31286] [226169] (1 PDB entry)
47. Species Trypanosoma brucei [TaxId:999953] [236068] (2 PDB entries)
48. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [226162] (1 PDB entry)
49. Species Vibrio cholerae [TaxId:345073] [269172] (7 PDB entries)
50. Species Xylella fastidiosa [TaxId:183190] [189265] (2 PDB entries)

More info for Family c.72.1.0: automated matches

Timeline for Family c.72.1.0: automated matches:

Family c.72.1.0: automated matches first appeared in SCOPe 2.01
Family c.72.1.0: automated matches appears in SCOPe 2.07