Lineage for d4g4sm_ (4g4s M:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2594580Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2594581Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2594772Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2597201Protein Proteasome beta subunit (catalytic) [56252] (7 species)
  7. 2597210Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (202 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 2597240Domain d4g4sm_: 4g4s M: [202191]
    Other proteins in same PDB: d4g4sa_, d4g4sc_, d4g4sd_, d4g4se_, d4g4sf_, d4g4sg_, d4g4si_, d4g4sl_
    automated match to d1rypm_
    complexed with ldz, mg

Details for d4g4sm_

PDB Entry: 4g4s (more details), 2.49 Å

PDB Description: Structure of Proteasome-Pba1-Pba2 Complex
PDB Compounds: (M:) Proteasome component C5

SCOPe Domain Sequences for d4g4sm_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4g4sm_ d.153.1.4 (M:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
qfnpygdnggtilgiagedfavlagdtrnitdysinsryepkvfdcgdnivmsangfaad
gdalvkrfknsvkwyhfdhndkklsinsaarniqhllygkrffpyyvhtiiagldedgkg
avysfdpvgsyereqcraggaaaslimpfldnqvnfknqyepgtngkvkkplkylsveev
iklvrdsftsaterhiqvgdgleilivtkdgvrkefyelkrd

SCOPe Domain Coordinates for d4g4sm_:

Click to download the PDB-style file with coordinates for d4g4sm_.
(The format of our PDB-style files is described here.)

Timeline for d4g4sm_: