SCOPe 2.04: Domain d2zr1d1: 2zr1 D:5-140

Lineage for d2zr1d1 (2zr1 D:5-140)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.42: beta-Trefoil [50352] (8 superfamilies)
   barrel, closed; n=6, S=12; and a hairpin triplet; meander
   duplication: has internal pseudo threefold symmetry

4. Superfamily b.42.2: Ricin B-like lectins [50370] (4 families)

5. Family b.42.2.1: Ricin B-like [50371] (11 proteins)

6. Protein Agglutinin-1 chain B [159150] (1 species)

7. Species Abrus precatorius [TaxId:3816] [159151] (2 PDB entries)
   Uniprot Q9M6E9 287-420! Uniprot Q9M6E9 421-547

8. Domain d2zr1d1: 2zr1 D:5-140 [198811]
   Other proteins in same PDB: d2zr1a_, d2zr1c_
   automated match to d2q3nb2
   complexed with nag, ndg

Details for d2zr1d1

PDB Entry: 2zr1, 2.6 Å

PDB Description: agglutinin from abrus precatorius

PDB Compounds: (D:) Agglutinin-1 chain B

SCOPe Domain Sequences for d2zr1d1:

Sequence; same for both SEQRES and ATOM records:

>d2zr1d1 b.42.2.1 (D:5-140) Agglutinin-1 chain B {Abrus precatorius [TaxId: 3816]}
skicsshyeptvriggrdglcvdvsdnaynngnpiilwkckdqlevnqlwtlksdktirs
kgkclttygyapgnyvmiydcssavaeatywdiwdngtiinpksglvlsaesssmggtlt
vqkndyrmrqgwrtgn

Timeline for d2zr1d1:

• d2zr1d1 first appeared in SCOPe 2.03
  
• d2zr1d1 appears in SCOPe 2.05
  
• d2zr1d1 appears in the current release, SCOPe 2.08