SCOPe 2.03: Domain d3vmka_: 3vmk A:

Lineage for d3vmka_ (3vmk A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
   consists of two intertwined (sub)domains related by pseudo dyad; duplication
   3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families)
   the constituent families form similar dimers

5. Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases [53660] (4 proteins)
   the active site is between the two identical subunits

6. Protein 3-isopropylmalate dehydrogenase, IPMDH [53661] (10 species)

7. Species Shewanella benthica [TaxId:43661] [195907] (1 PDB entry)

8. Domain d3vmka_: 3vmk A: [197350]
   automated match to d1cnza_
   complexed with cl, ipm, mg

Details for d3vmka_

PDB Entry: 3vmk, 1.48 Å

PDB Description: 3-isopropylmalate dehydrogenase from shewanella benthica db21 mt-2

PDB Compounds: (A:) 3-isopropylmalate dehydrogenase

SCOPe Domain Sequences for d3vmka_:

Sequence; same for both SEQRES and ATOM records:

>d3vmka_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Shewanella benthica [TaxId: 43661]}
hhhhhgssyqiavlagdgigpevmaearkvlaavekrfdlsieyseydvggaaidnhgcp
lpeatlkgceaadavlfgsvggpkwehlppndqpergallplrghfelfcnmrpaklhpg
lehmsplrsdisekgfdilcvreltggiyfgkpkgrqgegeneeafdtmrysrkeirria
kiafesaqgrrkkvtsvdkanvlacsvlwrevveevakdypdvelehiyidnatmqllrr
pnefdvmlcsnlfgdivsdeiamltgsmgllasismnsqgfgmyepaggsapdiagqgia
npvaqilsaalllrhslkledaalaieaavskalsdgyltcellpasersqakstsqmgd
yiaqaiaeg

Timeline for d3vmka_:

• d3vmka_ first appeared in SCOPe 2.02
  
• d3vmka_ appears in SCOPe 2.04
  
• d3vmka_ appears in the current release, SCOPe 2.08, called d3vmka1