SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.24: Pyridoxine 5'-phosphate synthase [63892] (2 families)
Family c.1.24.0: automated matches [191640] (1 protein)
not a true family
Protein automated matches [191177] (4 species)
not a true protein

Species:

Burkholderia pseudomallei [TaxId:320372] [225631] (1 PDB entry)
- Domains for 3gk0:
  1. Domain d3gk0a_: 3gk0 A: [210552]
    automated match to d3o6ca_
    complexed with dxp, po4
  2. Domain d3gk0b_: 3gk0 B: [210553]
    automated match to d3o6ca_
    complexed with dxp, po4
  3. Domain d3gk0c_: 3gk0 C: [210554]
    automated match to d3o6ca_
    complexed with dxp, po4
  4. Domain d3gk0d_: 3gk0 D: [210555]
    automated match to d3o6ca_
    complexed with dxp, po4
  5. Domain d3gk0e_: 3gk0 E: [210556]
    automated match to d3o6ca_
    complexed with dxp, po4
  6. Domain d3gk0f_: 3gk0 F: [210557]
    automated match to d3o6ca_
    complexed with dxp, po4
  7. Domain d3gk0g_: 3gk0 G: [210558]
    automated match to d3o6ca_
    complexed with dxp, po4
  8. Domain d3gk0h_: 3gk0 H: [210559]
    automated match to d3o6ca_
    complexed with dxp, po4
Campylobacter jejuni [TaxId:192222] [189430] (2 PDB entries)
1. Domain for 3o6c:
  - Domain d3o6ca1: 3o6c A:1-257 [182834]
    Other proteins in same PDB: d3o6ca2
    automated match to d1ho1a_
    complexed with po4
2. Domain for 3o6d:
  - Domain d3o6da1: 3o6d A:1-257 [182835]
    Other proteins in same PDB: d3o6da2
    automated match to d1ho1a_
    complexed with po4, pxp
Pseudomonas aeruginosa [TaxId:287] [276963] (1 PDB entry)
- Domains for 5dlc:
  1. Domain d5dlca_: 5dlc A: [276964]
    automated match to d3gk0a_
    complexed with po4
  2. Domain d5dlcb_: 5dlc B: [276967]
    automated match to d3gk0a_
    complexed with po4
  3. Domain d5dlcc_: 5dlc C: [276965]
    automated match to d3gk0a_
    complexed with po4
  4. Domain d5dlcd_: 5dlc D: [276966]
    automated match to d3gk0a_
    complexed with po4
Stenotrophomonas maltophilia [TaxId:522373] [382929] (1 PDB entry)
- Domains for 6w6a:
  1. Domain d6w6aa1: 6w6a A:1-247 [382941]
    Other proteins in same PDB: d6w6aa2, d6w6ab2
    automated match to d3f4ne_
    complexed with po4
  2. Domain d6w6ab1: 6w6a B:1-247 [382930]
    Other proteins in same PDB: d6w6aa2, d6w6ab2
    automated match to d3f4ne_
    complexed with po4

More info for Protein automated matches from c.1.24.0: automated matches

Timeline for Protein automated matches from c.1.24.0: automated matches:

Protein automated matches from c.1.24.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from c.1.24.0: automated matches appears in SCOPe 2.06
Protein automated matches from c.1.24.0: automated matches appears in the current release, SCOPe 2.08