PDB entry 5dlc

View 5dlc on RCSB PDB site
Description: X-ray Crystal Structure of a Pyridoxine 5-prime-phosphate synthase from Pseudomonas aeruginosa
Class: transferase
Keywords: SSGCID, Psuedomonas aeruginosa, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2015-09-04, released 2015-09-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pyridoxine 5'-phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: PDXJ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dlca_
  • Chain 'B':
    Compound: pyridoxine 5'-phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: PDXJ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dlcb_
  • Chain 'C':
    Compound: pyridoxine 5'-phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: PDXJ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dlcc_
  • Chain 'D':
    Compound: pyridoxine 5'-phosphate synthase
    Species: Pseudomonas aeruginosa [TaxId:287]
    Gene: PDXJ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dlcd_
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dlcA (A:)
mahhhhhhmteatrillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlred
rrhiqerdvrvlkevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldv
agqeqrirdavrrlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqa
relqrvregvalgrslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrq
avaemkalmlaaatkr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dlcA (A:)
trillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlredrrhiqerdvrvl
kevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldvagqeqrirdavr
rlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqarelqrvregval
grslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrqavaemkalmlaa
at

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dlcB (B:)
mahhhhhhmteatrillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlred
rrhiqerdvrvlkevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldv
agqeqrirdavrrlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqa
relqrvregvalgrslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrq
avaemkalmlaaatkr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dlcB (B:)
trillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlredrrhiqerdvrvl
kevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldvagqeqrirdavr
rlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqarelqrvregval
grslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrqavaemkalmlaa
at

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dlcC (C:)
mahhhhhhmteatrillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlred
rrhiqerdvrvlkevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldv
agqeqrirdavrrlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqa
relqrvregvalgrslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrq
avaemkalmlaaatkr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dlcC (C:)
trillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlredrrhiqerdvrvl
kevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldvagqeqrirdavr
rlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqarelqrvregval
grslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrqavaemkalmlaa
at

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dlcD (D:)
mahhhhhhmteatrillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlred
rrhiqerdvrvlkevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldv
agqeqrirdavrrlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqa
relqrvregvalgrslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrq
avaemkalmlaaatkr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dlcD (D:)
trillgvnidhvatlrqargtrypdpvkaaldaeeagadgitvhlredrrhiqerdvrvl
kevlqtrmnfemgvteemlafaeeirpahsclvperreeltteggldvagqeqrirdavr
rlaavgsevslfidpdprqieasarvgapaielhtgryadaedpeeqarelqrvregval
grslglivnaghglhyhnvepvaaidginelnighaivahalfvgfrqavaemkalmlaa
at