Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010502Fold d.306: YefM-like [143119] (1 superfamily)
    core: beta-alpha(2)-beta(2)-alpha; mixed beta-sheet, order:123, strands 1 and 2 are parallel; forms compact dimer with a single beta-sheet;
  4. 3010503Superfamily d.306.1: YefM-like [143120] (2 families) (S)
  5. 3010517Family d.306.1.0: automated matches [191570] (1 protein)
    not a true family
  6. 3010518Protein automated matches [190989] (3 species)
    not a true protein

Species:

  1. 3010519Mycobacterium tuberculosis [TaxId:1773] [188691] (3 PDB entries)
    1. Domains for 3cto:
      1. 3010524Domain d3ctoa_: 3cto A: [173458]
        Other proteins in same PDB: d3ctoe_
        automated match to d2a6qa1
        complexed with so4
      2. 3010525Domain d3ctob_: 3cto B: [173459]
        Other proteins in same PDB: d3ctoe_
        automated match to d2a6qa1
        complexed with so4
      3. 3010526Domain d3ctoc_: 3cto C: [173460]
        Other proteins in same PDB: d3ctoe_
        automated match to d2a6qa1
        complexed with so4
      4. 3010527Domain d3ctod_: 3cto D: [173461]
        Other proteins in same PDB: d3ctoe_
        automated match to d2a6qa1
        complexed with so4
    2. Domains for 3d55:
      1. 3010520Domain d3d55a_: 3d55 A: [173685]
        automated match to d2a6qa1
        complexed with so4
      2. 3010521Domain d3d55b_: 3d55 B: [173686]
        automated match to d2a6qa1
        complexed with so4
      3. 3010522Domain d3d55c_: 3d55 C: [173687]
        automated match to d2a6qa1
        complexed with so4
      4. 3010523Domain d3d55d_: 3d55 D: [173688]
        automated match to d2a6qa1
        complexed with so4
    3. Domains for 3oei:
      1. 3010528Domain d3oeia_: 3oei A: [193714]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3d55d_
        complexed with flc
      2. 3010529Domain d3oeib_: 3oei B: [200036]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      3. 3010530Domain d3oeie_: 3oei E: [200037]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      4. 3010531Domain d3oeif_: 3oei F: [200038]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      5. 3010532Domain d3oeii_: 3oei I: [200039]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      6. 3010533Domain d3oeij_: 3oei J: [200040]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      7. 3010534Domain d3oeim_: 3oei M: [200041]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
      8. 3010535Domain d3oein_: 3oei N: [200042]
        Other proteins in same PDB: d3oeic1, d3oeic2, d3oeid1, d3oeid2, d3oeig_, d3oeih1, d3oeih2, d3oeik_, d3oeil_, d3oeio_, d3oeip_
        automated match to d3oeia_
        complexed with flc
  2. 3010536Staphylococcus aureus [TaxId:1280] [385725] (1 PDB entry)
  3. 3010539Staphylococcus aureus [TaxId:93061] [390796] (1 PDB entry)

More info for Protein automated matches from d.306.1.0: automated matches

Timeline for Protein automated matches from d.306.1.0: automated matches: