SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
Superfamily c.47.1: Thioredoxin-like [52833] (24 families)
Family c.47.1.15: KaiB-like [102449] (3 proteins)
Pfam PF07689; contains members with alternative folds
Protein automated matches [190797] (3 species)
not a true protein

Species:

Synechococcus elongatus [TaxId:32046] [188470] (1 PDB entry)
- Domains for 2qke:
  1. Domain d2qkea_: 2qke A: [167692]
    automated match to d1r5pb_
  2. Domain d2qkeb_: 2qke B: [167693]
    automated match to d1r5pb_
  3. Domain d2qkec_: 2qke C: [167694]
    automated match to d1r5pb_
  4. Domain d2qked_: 2qke D: [167695]
    automated match to d1r5pb_
  5. Domain d2qkee_: 2qke E: [167696]
    automated match to d1r5pb_
  6. Domain d2qkef_: 2qke F: [167697]
    automated match to d1r5pb_
Synechocystis sp. [TaxId:1143] [188099] (1 PDB entry)
- Domains for 1wwj:
  1. Domain d1wwja_: 1wwj A: [162002]
    automated match to d1r5pb_
    complexed with bet, imd, mlt
  2. Domain d1wwjb_: 1wwj B: [162003]
    automated match to d1r5pb_
    complexed with bet, imd, mlt
  3. Domain d1wwjc_: 1wwj C: [162004]
    automated match to d1r5pb_
    complexed with bet, imd, mlt
  4. Domain d1wwjd_: 1wwj D: [162005]
    automated match to d1r5pb_
    complexed with bet, imd, mlt
Thermosynechococcus elongatus [TaxId:197221] [188059] (5 PDB entries)
1. Domains for 1vgl:
  1. Domain d1vgla_: 1vgl A: [161857]
    automated match to d1r5pb_
    complexed with hg
  2. Domain d1vglb_: 1vgl B: [161858]
    automated match to d1r5pb_
    complexed with hg
  3. Domain d1vglc_: 1vgl C: [161859]
    automated match to d1r5pb_
    complexed with hg
  4. Domain d1vgld_: 1vgl D: [161860]
    automated match to d1r5pb_
    complexed with hg
2. Domain for 5jwo:
  - Domain d5jwob_: 5jwo B: [332449]
    automated match to d2qkeb_
    complexed with adp
3. Domains for 5jwr:
  1. Domain d5jwrb_: 5jwr B: [332397]
    automated match to d2qkeb_
    complexed with po4
  2. Domain d5jwrd_: 5jwr D: [332405]
    automated match to d2qkeb_
    complexed with po4
4. Domain for 5jyt:
  - Domain d5jyta1: 5jyt A:1-99 [332427]
    Other proteins in same PDB: d5jyta2
    automated match to d2qkeb_
5. Domain for 5jyv:
  - Domain d5jyvb1: 5jyv B:1-99 [332443]
    Other proteins in same PDB: d5jyvb2
    automated match to d2qkeb_

More info for Protein automated matches from c.47.1.15: KaiB-like

Timeline for Protein automated matches from c.47.1.15: KaiB-like:

Protein automated matches from c.47.1.15: KaiB-like first appeared in SCOPe 2.01
Protein automated matches from c.47.1.15: KaiB-like appears in SCOPe 2.05
Protein automated matches from c.47.1.15: KaiB-like appears in SCOPe 2.07
Protein automated matches from c.47.1.15: KaiB-like appears in the current release, SCOPe 2.08