Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.47: Thioredoxin fold [52832] (2 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
  4. Superfamily c.47.1: Thioredoxin-like [52833] (24 families) (S)
  5. Family c.47.1.15: KaiB-like [102449] (3 proteins)
    Pfam PF07689; contains members with alternative folds
  6. Protein automated matches [190797] (3 species)
    not a true protein

Species:

  1. Synechococcus elongatus [TaxId:32046] [188470] (1 PDB entry)
  2. Synechocystis sp. [TaxId:1143] [188099] (1 PDB entry)
  3. Thermosynechococcus elongatus [TaxId:197221] [188059] (5 PDB entries)
    1. Domains for 1vgl:
      1. Domain d1vgla_: 1vgl A: [161857]
        automated match to d1r5pb_
        complexed with hg
      2. Domain d1vglb_: 1vgl B: [161858]
        automated match to d1r5pb_
        complexed with hg
      3. Domain d1vglc_: 1vgl C: [161859]
        automated match to d1r5pb_
        complexed with hg
      4. Domain d1vgld_: 1vgl D: [161860]
        automated match to d1r5pb_
        complexed with hg
    2. Domain for 5jwo:
    3. Domains for 5jwr:
      1. Domain d5jwrb_: 5jwr B: [332397]
        automated match to d2qkeb_
        complexed with po4
      2. Domain d5jwrd_: 5jwr D: [332405]
        automated match to d2qkeb_
        complexed with po4
    4. Domain for 5jyt:
    5. Domain for 5jyv:

More info for Protein automated matches from c.47.1.15: KaiB-like

Timeline for Protein automated matches from c.47.1.15: KaiB-like: