Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1775883Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 1775884Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 1776026Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 proteins)
    topologically similar to the C-terminal domain of PapD
  6. 1776088Protein automated matches [190234] (2 species)
    not a true protein

Species:

  1. 1776089Human (Homo sapiens) [TaxId:9606] [188037] (3 PDB entries)
    1. Domain for 2n1t:
    2. Domains for 2uzp:
      1. 1776091Domain d2uzpa_: 2uzp A: [168259]
        automated match to d1dsya_
        complexed with ca, co, edo, plp, so4
      2. 1776092Domain d2uzpb_: 2uzp B: [168260]
        automated match to d1dsya_
        complexed with ca, co, edo, plp, so4
      3. 1776093Domain d2uzpc_: 2uzp C: [168261]
        automated match to d1dsya_
        complexed with ca, co, edo, plp, so4
    3. Domain for 4dnl:
  2. 1776095Norway rat (Rattus norvegicus) [TaxId:10116] [186999] (6 PDB entries)
    1. Domain for 2bwq:
    2. Domain for 2cm5:
    3. Domains for 2cm6:
      1. 1776101Domain d2cm6a_: 2cm6 A: [130614]
        automated match to d3rpba_
        complexed with ca, po4
      2. 1776102Domain d2cm6b_: 2cm6 B: [130615]
        automated match to d3rpba_
        complexed with ca, po4
    4. Domains for 2yoa:
      1. 1776099Domain d2yoaa_: 2yoa A: [197125]
        automated match to d1uova_
        complexed with ca, scn, sep
      2. 1776100Domain d2yoab_: 2yoa B: [197129]
        automated match to d1uova_
        complexed with ca, scn, sep
    5. Domain for 4wee:
    6. Domains for 5ccj:
      1. 1776103Domain d5ccja_: 5ccj A: [275846]
        automated match to d2lhaa_
        complexed with gol, so4; mutant
      2. 1776104Domain d5ccjb_: 5ccj B: [275847]
        automated match to d2lhaa_
        complexed with gol, so4; mutant
      3. 1776105Domain d5ccjc_: 5ccj C: [275848]
        automated match to d2lhaa_
        complexed with gol, so4; mutant
      4. 1776106Domain d5ccjd_: 5ccj D: [275849]
        automated match to d2lhaa_
        complexed with gol, so4; mutant

More info for Protein automated matches from b.7.1.2: Synaptotagmin-like (S variant)

Timeline for Protein automated matches from b.7.1.2: Synaptotagmin-like (S variant):