SCOPe 2.01: Domain d1qnfa1: 1qnf A:205-475

Lineage for d1qnfa1 (1qnf A:205-475)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
   multihelical; consists of two all-alpha subdomains

4. Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (1 family)

5. Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain [48174] (2 proteins)

6. Protein C-terminal domain of DNA photolyase [48175] (3 species)
   N-terminal domain is alpha/beta and binds a light-harvesting cofactor

7. Species Synechococcus elongatus [TaxId:32046] [48177] (7 PDB entries)
   Uniprot P05327 1-474

8. Domain d1qnfa1: 1qnf A:205-475 [18777]
   Other proteins in same PDB: d1qnfa2
   complexed with fad, hdf

Details for d1qnfa1

PDB Entry: 1qnf, 1.8 Å

PDB Description: structure of photolyase

PDB Compounds: (A:) photolyase

SCOPe Domain Sequences for d1qnfa1:

Sequence; same for both SEQRES and ATOM records:

>d1qnfa1 a.99.1.1 (A:205-475) C-terminal domain of DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
pvepgetaaiarlqefcdraiadydpqrnfpaeagtsglspalkfgaigirqawqaasaa
halsrsdearnsirvwqqelawrefyqhalyhfpsladgpyrslwqqfpwenrealftaw
tqaqtgypivdaamrqltetgwmhnrcrmivasfltkdliidwrrgeqffmqhlvdgdla
annggwqwsassgmdpkplrifnpasqakkfdatatyikrwlpelrhvhpkdlisgeitp
ierrgypapivnhnlrqkqfkalynqlkaai

Timeline for d1qnfa1:

• d1qnfa1 first appeared (with stable ids) in SCOP 1.55, called d1qnf_1
  
• d1qnfa1 appears in SCOP 1.75
  
• d1qnfa1 appears in SCOPe 2.02
  
• d1qnfa1 appears in the current release, SCOPe 2.08