Lineage for d3riia_ (3rii A:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2155423Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2155424Protein automated matches [190230] (20 species)
    not a true protein
  7. 2155438Species Human (Homo sapiens) [TaxId:9606] [187072] (42 PDB entries)
  8. 2155457Domain d3riia_: 3rii A: [184984]
    automated match to d1ucha_
    complexed with edo, mg

Details for d3riia_

PDB Entry: 3rii (more details), 2 Å

PDB Description: Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme
PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase isozyme L5

SCOPe Domain Sequences for d3riia_:

Sequence, based on SEQRES records: (download)

>d3riia_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gewclmesdpgvftelikgfgcrgaqveeiwslepenfeklkpvhgliflfkwqpgeepa
gsvvqdsrldtiffakqvinnasatqaivsvllncthqdvhlgetlsefkefsqsfdaam
kglalsnsdvirqvhnsfarqqmfefdtktsakeedafhfvsyvpvngrlyeldglregp
idlgacnqddwisavrpviekriqkysegeirfnlmaivsdr

Sequence, based on observed residues (ATOM records): (download)

>d3riia_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gewclmesdpgvftelikgfgcrgaqveeiwslepenfeklkpvhgliflfkwqpgeepa
gsvvqdsrldtiffakqvinnasatqaivsvllncthqdvhlgetlsefkefsqsfdaam
kglalsnsdvirqvhnsfarqakeedafhfvsyvpvngrlyeldglregpidlgacnqdd
wisavrpviekriqkysegeirfnlmaivsdr

SCOPe Domain Coordinates for d3riia_:

Click to download the PDB-style file with coordinates for d3riia_.
(The format of our PDB-style files is described here.)

Timeline for d3riia_: