SCOPe 2.03: Domain d2y8qa_: 2y8q A:

Lineage for d2y8qa_ (2y8q A:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.129: TBP-like [55944] (11 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.6: KA1-like [103243] (3 families)
   contains a single copy of this fold

5. Family d.129.6.2: Ssp2 C-terminal domain-like [160723] (4 proteins)
   PfamB PB166430

6. Protein automated matches [190788] (2 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [188043] (5 PDB entries)

8. Domain d2y8qa_: 2y8q A: [170699]
   Other proteins in same PDB: d2y8qb_, d2y8qe1, d2y8qe2
   automated match to d2v8qa1
   complexed with adp, amp

Details for d2y8qa_

PDB Entry: 2y8q, 2.8 Å

PDB Description: Structure of the regulatory fragment of mammalian AMPK in complex with one ADP

PDB Compounds: (A:) 5'-amp-activated protein kinase catalytic subunit alpha-1

SCOPe Domain Sequences for d2y8qa_:

Sequence, based on SEQRES records:

>d2y8qa_ d.129.6.2 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
smawhlgirsqsrpndimaevcraikqldyewkvvnpyylrvrrknpvtstfskmslqly
qvdsrtylldfrsiddeiteaksgtatpqrsgsisnyrscqrsdsdaeaqgkpsevslts
svtsldsspvdvaprpgshtieffemcanliknsctvn

Sequence, based on observed residues (ATOM records):

>d2y8qa_ d.129.6.2 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
smawhlgirsqsrpndimaevcraikqldyewkvvnpyylrvrrknpvtstfskmslqly
qvdsrtylldfrsiddevaprpgshtieffemcanliknsctvn

Timeline for d2y8qa_:

• d2y8qa_ first appeared in SCOPe 2.01
  
• d2y8qa_ appears in SCOPe 2.02
  
• d2y8qa_ appears in SCOPe 2.04
  
• d2y8qa_ appears in the current release, SCOPe 2.08, called d2y8qa1