Lineage for d2hfca1 (2hfc A:2-237)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2164733Family d.22.1.1: Fluorescent proteins [54512] (6 protein domains)
  6. 2164737Protein Green fluorescent protein, GFP [54513] (4 species)
  7. 2164743Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (175 PDB entries)
    Uniprot P42212
  8. 2164748Domain d2hfca1: 2hfc A:2-237 [165079]
    Other proteins in same PDB: d2hfca2
    automated match to d1qyoa_
    complexed with mg

Details for d2hfca1

PDB Entry: 2hfc (more details), 1.2 Å

PDB Description: structure of s65t y66f r96a gfp variant in precursor state
PDB Compounds: (A:) Green fluorescent protein

SCOPe Domain Sequences for d2hfca1:

Sequence, based on SEQRES records: (download)

>d2hfca1 d.22.1.1 (A:2-237) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttltfgvqcfsrypdhmkqhdffksampegyvqeatisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagithgmdely

Sequence, based on observed residues (ATOM records): (download)

>d2hfca1 d.22.1.1 (A:2-237) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttltfgvqcfsrypdhmkqhdffksampegyvqeatisfkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhylstqsalskdpnekrdhmvllefvtaagitly

SCOPe Domain Coordinates for d2hfca1:

Click to download the PDB-style file with coordinates for d2hfca1.
(The format of our PDB-style files is described here.)

Timeline for d2hfca1:

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Domains from same chain:
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d2hfca2