Lineage for d1foka1 (1fok A:4-143)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2691777Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2692959Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2693269Family a.4.5.12: Restriction endonuclease FokI, N-terminal (recognition) domain [46824] (1 protein)
  6. 2693270Protein Restriction endonuclease FokI, N-terminal (recognition) domain [46825] (1 species)
    duplication: consists of three elaborated "winged helix" domains
  7. 2693271Species Flavobacterium okeanokoites [TaxId:244] [46826] (2 PDB entries)
  8. 2693278Domain d1foka1: 1fok A:4-143 [16137]
    Other proteins in same PDB: d1foka4
    protein/DNA complex

Details for d1foka1

PDB Entry: 1fok (more details), 2.8 Å

PDB Description: structure of restriction endonuclease foki bound to dna
PDB Compounds: (A:) protein (foki restriction endonuclease)

SCOPe Domain Sequences for d1foka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1foka1 a.4.5.12 (A:4-143) Restriction endonuclease FokI, N-terminal (recognition) domain {Flavobacterium okeanokoites [TaxId: 244]}
kirtfgwvqnpgkfenlkrvvqvfdrnskvhnevknikiptlvkeskiqkelvaimnqhd
liytykelvgtgtsirseapcdaiiqatiadqgnkkgyidnwssdgflrwahalgfieyi
nksdsfvitdvglaysksad

SCOPe Domain Coordinates for d1foka1:

Click to download the PDB-style file with coordinates for d1foka1.
(The format of our PDB-style files is described here.)

Timeline for d1foka1: