Lineage for d2vhno1 (2vhn O:1-117)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2883383Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2887539Superfamily c.55.4: Translational machinery components [53137] (3 families) (S)
  5. 2887540Family c.55.4.1: Ribosomal protein L18 and S11 [53138] (2 proteins)
  6. 2887541Protein Ribosomal protein L18 (L18p) [53139] (5 species)
  7. 2887551Species Escherichia coli [TaxId:562] [159642] (29 PDB entries)
    Uniprot P0C018 1-117
  8. 2887573Domain d2vhno1: 2vhn O:1-117 [153110]
    Other proteins in same PDB: d2vhn01, d2vhn11, d2vhn31, d2vhn41, d2vhnc1, d2vhnc2, d2vhnd1, d2vhne1, d2vhnf1, d2vhng1, d2vhng2, d2vhnh1, d2vhnh2, d2vhni1, d2vhni2, d2vhnj1, d2vhnk1, d2vhnl1, d2vhnm1, d2vhnn1, d2vhnp1, d2vhnq1, d2vhnr1, d2vhns1, d2vhnt1, d2vhnu1, d2vhnv1, d2vhnw1, d2vhnx1, d2vhny1, d2vhnz1
    protein/RNA complex; complexed with mg
    protein/RNA complex; complexed with mg

    has additional insertions and/or extensions that are not grouped together

Details for d2vhno1

PDB Entry: 2vhn (more details), 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome. (Structure 2 of 4)
PDB Compounds: (O:) 50S ribosomal protein L18

SCOPe Domain Sequences for d2vhno1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vhno1 c.55.4.1 (O:1-117) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
mdkksarirratrarrklqelgatrlvvhrtprhiyaqviapngsevlvaastvekaiae
qlkytgnkdaaaavgkavaeralekgikdvsfdrsgfqyhgrvqaladaareaglqf

SCOPe Domain Coordinates for d2vhno1:

Click to download the PDB-style file with coordinates for d2vhno1.
(The format of our PDB-style files is described here.)

Timeline for d2vhno1: