SCOPe 2.07: Domain d2j9ta1: 2j9t A:35-301

Lineage for d2j9ta1 (2j9t A:35-301)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.250: IpaD-like [140692] (1 superfamily)
   6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest

4. Superfamily a.250.1: IpaD-like [140693] (2 families)

5. Family a.250.1.1: IpaD-like [140694] (3 proteins)
   Pfam PF06511

6. Protein Putative membrane antigen BipD [140697] (1 species)

7. Species Burkholderia pseudomallei [TaxId:28450] [140698] (5 PDB entries)
   Uniprot Q63K37 35-301

8. Domain d2j9ta1: 2j9t A:35-301 [138153]
   complexed with bo3, flc

Details for d2j9ta1

PDB Entry: 2j9t, 2.7 Å

PDB Description: BipD of Burkholderia Pseudomallei

PDB Compounds: (A:) membrane antigen

SCOPe Domain Sequences for d2j9ta1:

Sequence, based on SEQRES records:

>d2j9ta1 a.250.1.1 (A:35-301) Putative membrane antigen BipD {Burkholderia pseudomallei [TaxId: 28450]}
mtdddlraagvdrrvpeqklgaaidefaslrlpdridgrfvdgrranltvfddarvavrg
haraqrnllerletellggtldtagdeggiqpdpilqglvdvigqgksdidayativegl
tkyfqsvadvmsklqdyisakddknmkidggkikaliqqvidhlptmqlpkgadiarwrk
elgdavsisdsgvvtinpdklikmrdslppdgtvwdtaryqawntafsgqkdniqndvqt
lvekyshqnsnfdnlvkvlsgaistlt

Sequence, based on observed residues (ATOM records):

>d2j9ta1 a.250.1.1 (A:35-301) Putative membrane antigen BipD {Burkholderia pseudomallei [TaxId: 28450]}
mtdddlraagvdrrvpeqklgaaidefaslrlpdridgrfvdgrranltvfddarvavrg
haraqrnllerletelldpilqglvdvigqgksdidayativegltkyfqsvadvmsklq
dyisakddknmkidggkikaliqqvidhlptmqlpkgadiarwrkelgdavsisdsgvvt
inpdklikmrdslppdgtvwdtaryqawntafsgqkdniqndvqtlvekyshqnsnfdnl
vkvlsgaistlt

Timeline for d2j9ta1:

• d2j9ta1 first appeared in SCOP 1.73
  
• d2j9ta1 appears in SCOPe 2.06
  
• d2j9ta1 appears in the current release, SCOPe 2.08