Lineage for d1yqka1 (1yqk A:136-323)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2003278Fold a.96: DNA-glycosylase [48149] (1 superfamily)
    multihelical; consists of two all-alpha domains
  4. 2003279Superfamily a.96.1: DNA-glycosylase [48150] (7 families) (S)
  5. 2003320Family a.96.1.3: DNA repair glycosylase, 2 C-terminal domains [48157] (3 protein domains)
  6. 2003361Protein 8-oxoguanine glycosylase [48160] (1 species)
  7. 2003362Species Human (Homo sapiens) [TaxId:9606] [48161] (24 PDB entries)
  8. 2003383Domain d1yqka1: 1yqk A:136-323 [123889]
    Other proteins in same PDB: d1yqka2, d1yqka3
    automatically matched to d1ebma1
    protein/DNA complex; complexed with ca, gol

Details for d1yqka1

PDB Entry: 1yqk (more details), 2.5 Å

PDB Description: Human 8-oxoguanine glycosylase crosslinked with guanine containing DNA
PDB Compounds: (A:) N-glycosylase/DNA lyase

SCOPe Domain Sequences for d1yqka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yqka1 a.96.1.3 (A:136-323) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
dpieclfsficsscnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveah
lrklglgyraryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadcic
lmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaq
avlfsadl

SCOPe Domain Coordinates for d1yqka1:

Click to download the PDB-style file with coordinates for d1yqka1.
(The format of our PDB-style files is described here.)

Timeline for d1yqka1: