Lineage for d1yqka1 (1yqk A:136-323)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 645404Fold a.96: DNA-glycosylase [48149] (1 superfamily)
    multihelical; consists of two all-alpha domains
  4. 645405Superfamily a.96.1: DNA-glycosylase [48150] (6 families) (S)
  5. 645439Family a.96.1.3: DNA repair glycosylase, 2 C-terminal domains [48157] (2 proteins)
  6. 645448Protein 8-oxoguanine glycosylase [48160] (1 species)
  7. 645449Species Human (Homo sapiens) [TaxId:9606] [48161] (23 PDB entries)
  8. 645468Domain d1yqka1: 1yqk A:136-323 [123889]
    Other proteins in same PDB: d1yqka2
    automatically matched to d1ebma1
    complexed with ca, gol; mutant

Details for d1yqka1

PDB Entry: 1yqk (more details), 2.5 Å

PDB Description: Human 8-oxoguanine glycosylase crosslinked with guanine containing DNA
PDB Compounds: (A:) N-glycosylase/DNA lyase

SCOP Domain Sequences for d1yqka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yqka1 a.96.1.3 (A:136-323) 8-oxoguanine glycosylase {Human (Homo sapiens) [TaxId: 9606]}
dpieclfsficsscnniaritgmverlcqafgprliqlddvtyhgfpslqalagpeveah
lrklglgyraryvsasaraileeqgglawlqqlressyeeahkalcilpgvgtkvadcic
lmaldkpqavpvdvhmwhiaqrdyswhpttsqakgpspqtnkelgnffrslwgpyagwaq
avlfsadl

SCOP Domain Coordinates for d1yqka1:

Click to download the PDB-style file with coordinates for d1yqka1.
(The format of our PDB-style files is described here.)

Timeline for d1yqka1:

Domains from same chain:
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d1yqka2