Lineage for d1vs6v1 (1vs6 V:1-94)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2061452Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 2061453Superfamily b.53.1: Ribosomal protein L25-like [50715] (3 families) (S)
  5. 2061454Family b.53.1.1: Ribosomal protein L25-like [50716] (2 protein domains)
  6. 2061455Protein Ribosomal protein L25 [50717] (1 species)
  7. 2061456Species Escherichia coli [TaxId:562] [50718] (32 PDB entries)
  8. 2061472Domain d1vs6v1: 1vs6 V:1-94 [120500]
    Other proteins in same PDB: d1vs601, d1vs611, d1vs621, d1vs631, d1vs641, d1vs6c1, d1vs6c2, d1vs6d1, d1vs6e1, d1vs6f1, d1vs6g1, d1vs6g2, d1vs6h1, d1vs6h2, d1vs6i1, d1vs6i2, d1vs6j1, d1vs6k1, d1vs6l1, d1vs6m1, d1vs6n1, d1vs6o1, d1vs6p1, d1vs6q1, d1vs6r1, d1vs6s1, d1vs6t1, d1vs6u1, d1vs6w1, d1vs6x1, d1vs6y1, d1vs6z1
    complexed with mg
    complexed with mg

Details for d1vs6v1

PDB Entry: 1vs6 (more details), 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (V:) 50S ribosomal protein L25

SCOPe Domain Sequences for d1vs6v1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vs6v1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1vs6v1:

Click to download the PDB-style file with coordinates for d1vs6v1.
(The format of our PDB-style files is described here.)

Timeline for d1vs6v1: